ID   AB079769; SV 1; linear; genomic RNA; STD; VRL; 1338 BP.
XX
AC   AB079769;
XX
DT   16-AUG-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Japanese yam mosaic virus gene for polyprotein, partial cds, isolate:A.
XX
KW   .
XX
OS   Japanese yam mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1338
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   ;
RL   Submitted (12-FEB-2002) to the INSDC.
RL   Shin-ichi Fuji, Akita Prefectural University, Faculty of Bioresource
RL   Sciences; 241-7 Kaidobata Nishi Shimoshinjo Nakano, Akita, Akita 010-0915,
RL   Japan (E-mail:sfuji@akita-pu.ac.jp, Tel:81-18-872-1640, Fax:81-18-872-1678)
XX
RN   [2]
RA   Fuji S., Nakamae H., Furuya H., Naito H.;
RT   "High diversity of the 5'-UTR, P1 and CP genomic regions of several
RT   Japanese yam mosaic virus and heterogenous population in a yam plant";
RL   Unpublished.
XX
DR   MD5; a59dbae33a95aa9e9700fb19ea4f0871.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1338
FT                   /organism="Japanese yam mosaic virus"
FT                   /isolate="A"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:79917"
FT   CDS             157..>1338
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /note="5'-terminal region"
FT                   /note="first protein and helper component regiion"
FT                   /db_xref="GOA:Q8JW19"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JW19"
FT                   /protein_id="BAC07492.1"
FT                   /translation="MAICIEKLTNPNLSDSPVFQLQFGTLPPVTISVTDSTNVTAMETD
FT                   LKPGKQNKPTDAQRKVNDNKAFIQSMHSEYTKQCTTLDRWEEEYNKARSMRPNSYKLVQ
FT                   TRQQRKAMLKRSMEKTSKQLKEQTDILEKCVIGPWGPPMNTFSIAAGPLPSAMETEKKW
FT                   PLHQTRSQRIKKSQMRPVKLDQGGFKKLVRELTTLMMLKSATFELCDKHTQKVSVCRRH
FT                   KKIYLKVHTMHEKGFNRARDVKIENFAQHILELMVARTSGNNWHSVRDIKPGYSGFVIN
FT                   RKTLHGAQSRAYGEIFIIRGNHEGKLYDARIKLSSTIRRKITHYSDPGVKFWKGFDTAF
FT                   QRYRKQDREHTCETDLDVEECGEVAALLCLALFPCGKITCNKCVEENLLSEGQA"
XX
SQ   Sequence 1338 BP; 479 A; 278 C; 283 G; 298 T; 0 other;
     aaaatataaa atctcaacaa gaaacaacga aaaccaagac atcaaaaacc tttgttaacg        60
     tttgcttcaa aatattcgaa ttaaacttcg aaaccacaca acccgcaaag aaccgtgact       120
     ttccggcctt tgcacttcac acccaccaaa accaccatgg caatttgcat tgagaaactc       180
     acgaacccaa acctgagcga ttcacctgta ttccaacttc aatttggaac acttccacct       240
     gttaccatta gtgtgactga ttccactaat gtgacggcaa tggagacgga tttaaaacca       300
     gggaagcaga ataagcccac tgacgcacaa aggaaagtga atgacaataa agcattcata       360
     caaagcatgc attctgaata tacaaagcaa tgtacaacac ttgataggtg ggaagaggaa       420
     tacaacaaag cccggagcat gagacccaac tcatataagc ttgtgcaaac gaggcagcag       480
     aggaaagcca tgcttaaacg tagcatggaa aagacaagca agcaactgaa agagcagaca       540
     gacatacttg aaaaatgtgt cataggtcca tggggtccac ctatgaacac tttcagtatt       600
     gcagctgggc cattgccgtc agcaatggaa actgaaaaga agtggccact acaccaaact       660
     cgatctcaac gaatcaagaa gagccaaatg agaccagtta agcttgatca aggaggattc       720
     aagaaacttg ttagggagtt gaccacactg atgatgttga aatcagcgac atttgagttg       780
     tgtgataaac acacacaaaa agtgagtgtt tgcaggcggc acaagaaaat ttatttgaaa       840
     gtgcacacaa tgcatgagaa aggctttaat agagcaagag atgtcaagat agaaaacttc       900
     gcacaacata tacttgagct tatggttgcc cgtacatcag gaaacaactg gcactcagtc       960
     cgtgatataa aacctggata cagtggtttt gttatcaaca ggaaaacctt gcatggagca      1020
     caatcacgtg catatggtga aatattcatt attcgtggta accatgaagg aaagttgtac      1080
     gacgcacgca tcaaattgtc gtccaccata cgcagaaaga taacacacta ctctgatcca      1140
     ggtgtcaaat tttggaaagg tttcgacaca gcctttcaac gatatagaaa acaggatcgt      1200
     gagcacactt gtgaaacgga tcttgacgtt gaagagtgtg gtgaggttgc tgctttattg      1260
     tgtctcgctc tgtttccatg tggaaaaata acatgcaata aatgtgtaga ggaaaacctg      1320
     ctatcggaag gtcaagcg                                                    1338
//