ID AB079765; SV 1; circular; genomic DNA; STD; VRL; 2758 BP. XX AC AB079765; XX DT 21-MAR-2003 (Rel. 75, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 7) XX DE Honeysuckle yellow vein virus DNA, complete genome, isolate: TLCV-Y. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2758 RA Kitamura K., Ikegami M.; RT ; RL Submitted (12-FEB-2002) to the INSDC. RL Contact:Masato Ikegami Department of Plant Pathology, Graduate School of RL Agricultural Science, Tohoku University; 1-1, Tsutsumi-dori, Amamiyamachi, RL Aoba-ku, Sendai, Miyagi 981-8555, Japan XX RN [2] RX DOI; .1007/s00705-003-0276-5. RX PUBMED; 15168208. RA Kitamura K., Murayama A., Ikegami M.; RT "Evidence for recombination among isolates of Tobacco leaf curl Japan virus RT and Honeysuckle yellow vein mosaic virus"; RL Arch. Virol. 149(6):1221-1229(2004). XX DR MD5; 6ed351176a2395803dd91e4b90b14ad3. XX FH Key Location/Qualifiers FH FT source 1..2758 FT /organism="Honeysuckle yellow vein virus" FT /isolate="TLCV-Y" FT /mol_type="genomic DNA" FT /country="Japan:Yamaguchi prefecture" FT /note="TLCV-Yamaguchi" FT /note="originally submitted 'Honeysuckle yellow vein mosaic FT virus-[Yamaguchi]'" FT /note="synonym: HYVMV-tobacco [Yamaguchi]" FT /note="synonym: Tobacco leaf curl Yamaguchi virus" FT /db_xref="taxon:240865" FT CDS 136..486 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /db_xref="GOA:Q80IM7" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q80IM7" FT /protein_id="BAC66124.1" FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVEATYSPDTVGYDLIRDL FT IGVVRAKNYVEATCRYRDFHSRIQGTSPSELRRPVCQPCECPHCPRHKQKEIMGSKAHV FT SEAQDIQDVQKP" FT CDS 296..1069 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q80IM6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q80IM6" FT /protein_id="BAC66125.1" FT /translation="MSKRPADIGIFTPAFRARRRLNFDGPYVSRVNVPIAQGTSKKRSW FT AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE FT PSTATIKQDLRDRLQVLHKFTGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS 390..704 FT /codon_start=1 FT /transl_table=1 FT /gene="V3" FT /db_xref="GOA:Q80IM5" FT /db_xref="UniProtKB/TrEMBL:Q80IM5" FT /protein_id="BAC66126.1" FT /translation="MSPLPKAQAKRDHGLKGPCIGSPGYTGCTEALMCLRGVKARVRSS FT LSRRKMMLVTLVKCYVSQILPVVMVLHIVLGRDFVLNRSISLERYGWMKTLSSRITLIT FT " FT CDS complement(1066..1470) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /db_xref="GOA:Q80IM4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q80IM4" FT /protein_id="BAC66127.1" FT /translation="MDSRTGVTITAAQARNGVYIWTVPNPLYFKITSHAQQPFNMDQDI FT ITVQIQFNHNLRNQLEIHKCFLSFRIWTRLHPQTSHFLRVFRTQVLKYLDNLGVISINN FT VIRAVDHVLYDVLEKTEYVQQFNDIKFKLY" FT CDS complement(1211..1618) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /db_xref="GOA:Q80IM3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q80IM3" FT /protein_id="BAC66128.1" FT /translation="MQSSSPSTAHSTQVPIKVRHRSEKRRQPRRRRIDINCGCSIYVAL FT GCANHGFTHRGHHHCSSGKEWRIYLDSAKSPIFQNHEPRPTTIQHGSGYNNCTDTIQPQ FT PQESTGDTQVLPLFQDLDSLTSSDFAFLEGI" FT CDS complement(1518..2609) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q80IM2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q80IM2" FT /protein_id="BAC66129.1" FT /translation="MPPPNRFKINAKNYFLTYPHCSLTKEEALSQIKALQTPTNKLFIR FT ICRELHEDGSPHLHILIQFEGKYTCRNQRFFDLVSPNRSAHFHPNIQGAKSSSDVKTYM FT EKDGDILDFGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALCILREKAPKDFVLQFH FT NLNSNLDRIFLPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPMSIVIEGD FT SRTGKTMWARSLSPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNAIFVTLYGP FT LYSGTHQGATQIREEETTTQEED" FT CDS complement(2159..2452) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q80IM1" FT /protein_id="BAC66130.1" FT /translation="MGALISTSSSNSRENIHAEINDSSTSYPQIGQHISIRTFRELKAR FT QMSRPTWKKTGTSLILEFSKSMEDQLEEVASLPTTRMPRQSTQDLSHRHSVY" XX SQ Sequence 2758 BP; 721 A; 546 C; 647 G; 844 T; 0 other; accggatggc cgcgcaaaat ttcgtggtgg tcccccctgt cggccaatag agttcgtgcc 60 ttgaaagtta gataagtgga tgttgacgtc agcttttgtc tttatatacg taagccctaa 120 ttttaaaggt taaagatgtg ggatccttta cttaacgatt tccctgaaac cgtacacggt 180 tttaggtgta tgctagcggt taaatacctt ctactggtcg aggctacata ctctccggat 240 acggtgggtt acgatctgat tcgtgatctt attggtgttg ttcgtgcgaa gaattatgtc 300 gaagcgacct gcagatatag ggattttcac tcccgcattc agggcacgtc gccgtctgaa 360 cttcgacggc ccgtatgtca gccgtgtgaa tgtccccatt gcccaaggca caagcaaaaa 420 gagatcatgg gctcaaaggc ccatgtatcg gaagcccagg atatacagga tgtacagaag 480 ccctgatgtg cctaaggggt gtgaaggccc gtgtaaggtc cagtctttcg agaagaaaga 540 tgatgttggt cactctggta aaatgttatg tatctcagat attacccgtg gtaatggtct 600 tacacatcgt gttgggaaga gattttgtat taaatcggtc tatatcattg gaaagatatg 660 gatggatgaa aacattaagc tcaagaatca cactaataac gtgatcttct ggcttgttag 720 agataggcgc cctgtgtccg ttccttatgg gttccaagag gcgtttaata tgtatgaaaa 780 tgaacctagt acagctacta tcaagcagga tctgagagat cgcttgcagg ttttacacaa 840 gttcactggt acggttacag gtggacaata tgcgtctaaa gaacaagcta tgatcaagcg 900 tttctggagg ttgaatcatc atgtcactta caatcaccaa gaggctgcta aatatgagaa 960 ccatactgaa aatgcattat tattgtatat ggcttgtact catgccagta atccagtgta 1020 tgctacatta aaaattagag tgtatttcta tgattcagta cagaattaat aaagtttgaa 1080 ttttatatca ttgaattgtt gtacatattc tgttttctct aatacatcat acaatacatg 1140 atcaactgcc ctaattacat tgttaattga aattacaccc aaattatcta aatatttcaa 1200 cacttgtgtc ctaaataccc tcaagaaatg cgaagtctga ggatgtaagc gagtccaaat 1260 cctgaaagag aggaagcact tgtgtatctc cagttgattc ctgaggttgt ggttgaattg 1320 tatctgtaca gttattatat cctgatccat gttgaatggt tgttgggcgt ggctcgtgat 1380 tttgaaatat aggggatttg gcactgtcca gatatatacg ccattccttg cctgagctgc 1440 agtgatggtg acccctgtgc gtgaatccat gatttgcgca ccctaatgcg acgtagatag 1500 aacacccgca gtttatgtca atcctcctcc tgcgtggttg tctcctcttc tctgatctgt 1560 gtcgcacctt gatgggtacc tgagtagagt gggccgtaga gggtgacgaa gattgcattt 1620 ttaattgccc acgcctttag ggcagcattc ttgtcctcgt ctaaatactc ggtgtatgat 1680 gacgttgggc ctggattgca gaggaagatt gttgggatac cacctttaat ttgaattggt 1740 ttcccgtact tggtgttgct ttgccagtcc ctttgggccc ccatgaactc tttaaagtgc 1800 tttaggtagt ggggatccac gtcatcaatg acgttgtacc aggcctcgtt gctgtaaacc 1860 ttggggctta agtcaaggtg gccgcaaaga tagttatgac gtggactgag agacctggcc 1920 cacatagtct tacctgtcct gctatccccc tctatcacaa tactcatggg cctccatggc 1980 cgcgctgcgg aatccctgac gttttcggca gcccattctt caagttgctc tggaacttga 2040 tcaaaggaag aagataaaaa tggagaaaca aattcctcca acggaggcag aaaaatccta 2100 tctaaattac tatttaaatt atgaaattgt aaaacaaaat ctttgggagc tttctccctt 2160 aatatacaga gtgccgatga cttagatcct gagttgattg cctcggcata cgcgtcgttg 2220 gcagactggc aacctcctct agctgatctt ccatcgactt ggaaaactcc aaaatcaagg 2280 atgtccccgt ctttttccat gtaggtcttg acatctgacg agcttttagc tccctgaatg 2340 ttcggatgga aatgtgctga cctatttggg gatacgaggt cgaagaatcg ttgatttcgg 2400 catgtatatt ttccctcgaa ttggatgagg atgtggagat gagggctccc atcttcgtgt 2460 aattcacgac aaattctgat gaacaattta ttggttggtg tttgtagggc ttttatctgg 2520 gagagagcct cttcttttgt aagagagcag tgtgggtatg tgagaaaata attctttgca 2580 tttattttga aacgatttgg gggaggcatg ttgactggtc aatcggaggc tctcaatctt 2640 tctatgcaat tgggggcatt gggggcttat ttatatggta gcctctaatg gcatatttgt 2700 aattttgaaa ttcaaaattt aaaattcaaa ttggtaaagc ggccatccgt ctaatatt 2758 //