ID AB079689; SV 1; circular; genomic DNA; STD; VRL; 2761 BP. XX AC AB079689; XX DT 21-MAR-2003 (Rel. 75, Created) DT 06-JUL-2018 (Rel. 137, Last updated, Version 6) XX DE Honeysuckle yellow vein virus DNA, complete genome, isolate: TLCV-Jp3. XX KW . XX OS Honeysuckle yellow vein virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Kitamura K., Ikegami M.; RT ; RL Submitted (11-FEB-2002) to the INSDC. RL Contact:Masato Ikegami Department of Plant Pathology, Graduate School of RL Agricultural Science, Tohoku University; 1-1, Tsutsumi-dori, Amamiyamachi, RL Aoba-ku, Sendai, Miyagi 981-8555, Japan XX RN [2] RX DOI; .1007/s00705-003-0276-5. RX PUBMED; 15168208. RA Kitamura K., Murayama A., Ikegami M.; RT "Evidence for recombination among isolates of Tobacco leaf curl Japan virus RT and Honeysuckle yellow vein mosaic virus"; RL Arch. Virol. 149(6):1221-1229(2004). XX DR MD5; e574a4f62b24a498d7e618521ce26593. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Honeysuckle yellow vein virus" FT /isolate="TLCV-Jp3" FT /mol_type="genomic DNA" FT /country="Japan:Nara" FT /clone="pTLNw8" FT /note="originally submitted 'Tobacco leaf curl Japan FT virus-[JP3]'" FT /db_xref="taxon:240865" FT CDS 147..497 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /db_xref="GOA:Q80IN3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q80IN3" FT /protein_id="BAC66118.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLLAVEAIYSPDTIGYDLLRDL FT IGVVRAKNYVEASCRYRDFHSRLQSTAPSELRQPVCQPCECPHCPRHKQKEIMGPKAHL FT SEAQDVQNVSKP" FT CDS 307..1080 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q80IN2" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q80IN2" FT /protein_id="BAC66119.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYANRASAPIALATNRRRSW FT AQRPIYRKPRMYRMYRSPDVPKGCEGPCKVQSYEKKNDVGHSGTLLCVSDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKTKNHTNNVLFWLVRDRRPGTTPYGFQEAFNMFENE FT PSTATVKQELRDRLQVLHRFSATVTGGQYASKEQAIIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS complement(1077..1481) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /db_xref="GOA:Q80IN1" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q80IN1" FT /protein_id="BAC66120.1" FT /translation="MDSRTGDTITAAQAWNGAYIWTVPNPLYFKITNHAQRPFNMDQDI FT ITIQIQFNHNLRSQLDLHKCFLTFKIWTHLQPLTSYFLNVFRKRVLQYLDNLGVISINN FT VIRAVDYVLYDVLRGTQYVQQSSDIKFKLY" FT CDS complement(1222..1629) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /db_xref="GOA:Q80IN0" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q80IN0" FT /protein_id="BAC66121.1" FT /translation="MRPSSPSTAHSTQLPIKVQHKLGKKRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGMEWRVYLDSAKSPIFQNHEPRSTSVQHGSGHNNDTDSVQPQ FT PQISTGSTQVLPDLQDLDSLTTSDFLFLECI" FT CDS complement(1529..2617) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q80IM9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q80IM9" FT /protein_id="BAC66122.1" FT /translation="MAPPKRFKINSKNYFLTYPHCTLTKGEALSQIQALETPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKYQCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDVIDYGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVLQFH FT NLNSNLDRIFSPQLEEFVCPFSSSSFDRVPEELEEWAAETVRDSARPWRPMSIVIEGDS FT RTGKTMWARSLSPHHNYLCGHLDLSPKVYSNSAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNASFVTLYGPL FT YSTSHQGSAQIREEESTSQTAD" FT CDS complement(2167..2460) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q80IM8" FT /protein_id="BAC66123.1" FT /translation="MGALISTFSSSSKENTSAQINDSSISSPQLGQHISIQTFRELRAR FT QTSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTLMPRQSTQALNHRPCLY" XX SQ Sequence 2761 BP; 729 A; 558 C; 634 G; 840 T; 0 other; tataatatta ccggatggcc gcccgaaatt tcgtggtggt cccccccttg tcggccaatg 60 ttgtgcgttc ctggaacgtt agataagtgg aaagtgacgt atgcttttgt ctttatatac 120 gtcagcccta attttaaagt ttaaccatgt gggatccttt acttaacgag ttcccagaaa 180 ccgttcacgg ttttaggtgt atgcttgcgg ttaagtacct gttagcggtt gaagctatat 240 actctcctga tactataggt tacgatttgc ttcgtgatct tataggtgtg gttcgtgcga 300 agaactatgt cgaagcgtcc tgcagatata gggattttca ctcccgtctc caaagtacgg 360 cgccgtctga acttcgacag cccgtatgcc aaccgtgcga gtgcccccat tgccctcgcc 420 acaaacagaa ggagatcatg ggcccaaagg cccatctatc ggaagcccag gatgtacaga 480 atgtatcgaa gccctgatgt gcccaagggg tgtgaaggcc cgtgtaaggt ccagtcatat 540 gagaagaaaa atgatgttgg tcattctggt actctgcttt gtgtatccga tattacccgt 600 ggtaatgggc ttactcatcg tgttgggaag agattttgta taaaatctgt ttatataatt 660 ggtaaaatat ggatggatga gaatattaag acgaagaatc acactaacaa cgtgttattc 720 tggttagtta gagatagacg acctggtaca actccttatg gatttcagga ggcattcaat 780 atgtttgaga acgagcccag cacagcaact gttaaacagg aattaagaga tcgtttgcag 840 gttttacaca gattcagtgc cactgttact ggtggacaat atgcgtctaa ggagcaagcg 900 atcataaagc gtttttggaa gctcaatcac catgttactt ataatcatca ggagcaggct 960 aaatatgaga atcatactga aaatgcttta ttattgtata tggcttgtac acatgccagt 1020 aatcctgtgt atgctactct aaagatccga gtgtatttct acgattcagt acaaaattaa 1080 taaagtttga attttatatc acttgattgt tgtacatact gtgttcctct caatacatcg 1140 tacaatacat aatcaactgc cctaattaca ttgttaattg aaattacacc caaattatct 1200 aaatactgta atacacgttt cctaaataca ttcaagaaat aagaagtcag aggttgtaag 1260 tgagtccaga tcttgaaggt caggaagcac ttgtgtagat ccagttgaga tctgaggttg 1320 tggttgaact gaatctgtat cgttattatg tcctgatcca tgttgaacgg acgttgagcg 1380 tggttcgtga ttttgaaata taggggattt ggcactgtcc agatatacgc gccattccat 1440 gcctgagctg cagtgatggt gtcccctgtg cgtgaatcca tggttagcac aacctagagc 1500 gacgtaaata gaacaaccgc agtttaagtc aatccgccgt ctgcgaggtg ctctcttctt 1560 ccctaatttg tgctgaacct tgatgggaag ttgagtagag tgggccgtag agggtgacga 1620 aggacgcatt tttaattgcc catgctttta gtgctgcgtt cttgtcctca tctaaatact 1680 cggtgtatga tgacgttggg cctggattgc agaggaagat tgttgggata ccacctttaa 1740 tttgaattgg tttcccgtat ttggtgttgc tttgccagtc tctttgggcc cccatgaatt 1800 ctttaaagtg ctttagatag tggggatcca cgtcatcaat cacgttgtac caagcactgt 1860 tgctgtaaac cttggggctt aagtcaagat ggccgcaaag gtaattgtga tgtgggctca 1920 acgacctggc ccacatggtc ttccctgtcc tgctatcccc ctcaatcaca atgctcatgg 1980 gcctccacgg ccgcgcagaa tccctgacgg tctctgcagc ccattcctcg agttcttccg 2040 gaactcgatc aaaggaagaa gaagaaaatg gacaaacaaa ttcctccaat tgaggactaa 2100 aaatcctatc taaattacta tttaaattat gaaattgtaa aacaaaatct ttgggagctt 2160 tctcccttaa tatagacaag gccgatgatt tagagcctga gttgattgcc tcggcataag 2220 cgtcgttggc agattggcaa cctcctctag ctgatcttcc atcgacctgg aaaactccat 2280 aatcaatgac gtctccgtct ttctccatgt aggttttgac gtctgacgag ctcttagctc 2340 cctgaatgtt tggatggaaa tgtgctgacc tagttgggga gacgagatcg aagaatcgtt 2400 gatttgtgca ctggtatttt ccttcgaact ggatgagaac gtggagatga gggctcccat 2460 cttcgtgtag ttctctgcaa attctgatga acaatttatt tgttggtgtt tctagggctt 2520 gaatctggga aagggcttct cctttggtta gagtgcagtg tgggtatgtg aggaaataat 2580 ttttgctatt tattttaaaa cgctttggtg gtgccatatt tacaaatatg cccttgtacc 2640 ccgattcgga gagaaatctt ctatgcagtc aatcggtgta atggggtaca atatatactc 2700 ctccttcttt tttattttga aattcaaaat tcaaaattca aattggtaaa gcggccatcc 2760 g 2761 //