ID AB078435; SV 1; linear; genomic RNA; STD; VRL; 6356 BP. XX AC AB078435; XX DT 22-JAN-2002 (Rel. 70, Created) DT 21-JUN-2008 (Rel. 96, Last updated, Version 5) XX DE Tobacco mild green mosaic virus complete genome, strain:Japanese. XX KW . XX OS Tobacco mild green mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6356 RA Okuno T., Hamada H., Takeuchi S., Morishima N., Yoshimoto E., Hikichi Y.; RT ; RL Submitted (18-JAN-2002) to the INSDC. RL Contact:Tetsuro Okuno Kyoto University; Kitashirakawa Oiwakecho, Sakyou RL 606-8502, Japan XX RN [2] RA Morishima N., Ido T., Hamada H., Yoshimoto E., Mizumoto H., Takeuchi S., RA Kiba A., Hikichi Y., Okuno T.; RT "Infectious in vitro transcripts from a cDNA clone of Tobacco mild green RT mosaic tobamovirus and its biological activity in host and nonhost plants RT and in their protoplasts"; RL J. Gen. Plant Pathol. 69:335-338(2003). XX DR MD5; deb5a44e1db4c8dba7b2443bc47e159a. DR EuropePMC; PMC6258955; 30257999. XX FH Key Location/Qualifiers FH FT source 1..6356 FT /organism="Tobacco mild green mosaic virus" FT /strain="Japanese" FT /mol_type="genomic RNA" FT /note="RNA transcripts synthesized in vitro from the cDNA FT clone of TMGMV-J direct systemic infection in Nicotiana FT benthamiana" FT /note="TMGMV-Japanese strain" FT /db_xref="taxon:12241" FT CDS 72..4901 FT /codon_start=1 FT /transl_table=1 FT /transl_except=(pos:3405..3407,aa:OTHER) FT /product="183kDa protein" FT /note="position 3405..3407 is readthrough product" FT /db_xref="GOA:Q8V703" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8V703" FT /protein_id="BAB83986.1" FT /translation="MAHIQSTISNALLESVSGKNTLVNDLARRRMYDTAVDEFNARDRR FT PKVNFPKTISEEQTLLVTNAYPEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPYGSP FT TYDIGGNFAAHLFKGRDYVHCCMPNLDIRDIMRHEGQKDSIEMYLSRLSRSNKVIPEFQ FT RAAFNRYAEAPNEVCCSKTFQDCRIHPPENSGRRYAISLHSLYDIPVHEFGAALISKDI FT HICYAAFHFSEALLLDQTEVTLNEIGATFKREGDDVSFFFADESTLNYNHKYKNILHYV FT VKSYFPASSRIVYFKEFLVTRVNTWFCKFTKVDTYILYKSVRQVGCDSDQFYEAMEDAF FT TYKKALAMFNTERAILRDTASVNFWFPKMKDMVIVPLFEGSITSKKMTRSEVIVNRDFV FT YTVLNHIRTYQAKALTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQ FT TKLAALQDDIVMGKFRCLDKTTSELIWDEVGKFFGNVFPTIKERLVSRKILDVSENALK FT IKIPDLYVTWKDRFVAEYTKSEELPHLDIKKDLEEAEQMYDALSELSILRDADNFDIAK FT FKDMCKALCVNPDVAARVIVAVAENRSGLTLTFDKPTEENVAKALKSTASEAVVRLEPT FT SDEVMVNKFSIAERGKLPVCAESHGLTNANLEHQELESLNDFHKACVDSVITKQMASVV FT YTGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDVVGYDSDSREKVGVWDVTLKKWLLK FT PAAKGHSWGVVLDYKGKMFTALLSYEGDRMVTESDWRRVAVSSDTMVYSDIAKLQNLRK FT TMRDGEPHEPTAKMVLVDGVPGCGKTKEILERVDLDEDLILVPGKQAAAMIRRRANSSG FT LIRATMDNVRTVDSFLMHPKPRTHKRLFIDEGLMLHTGCVNFLVLISGCDIAYIYGDTQ FT QIPFINRVQNFPYPKHFEKLQVDEVEMRRTTLRCPGDVNFFLQSKYEGAVSTTSTVQRS FT VSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHEIQGETFEDVSLV FT RLTATPLTLISKSSPHVLVALTRHTKSFKYYTVVLDPLVQIISDLSSLSSFLLEMYMVE FT AGGRXQLQMDAVFKGHNLFVATPKSGDFPDLQFYYDVCLPGNSTILNKYDAVTMRLRDN FT SLNVKDCVLDFSKSIPMPKEVKPCLEPVLRTAAEPPRVAGLLENLVAMIKRNFNAPDLT FT GTIDIESTASVVVDKFFDSYFLKKEKYTKNIAGVMTKDSMMRWLGKQERSTIGQLANYN FT FVDLPAIDQYKHMIKAQPKQKLDLSIQNEYPALQTIVYHSKQINGIFGPVFSELTRLLL FT EAVDSQKFLFFTRKTPEQIQEFFSDLDSHVPMDVLELDISKYDKSQNEFHCAVEYEIWK FT RLGLNEFLAEVWKQGHRKTTLKDYIAGIKTCLWYQRKSGDVTTFIGNTVIIAACLGSML FT PMEKVIKGAFCGDDSVLYFPKGLDFPDIQSCANLMWNFEAKLYRKKYGYFCGRYIIHHD FT KGAIVYYDPLKLISKLGAKHIKDYDHLEELRVSLCDVACSLGNCAYFPQLNAAIKEVHK FT TAIDGSFAFNCVNKFLCDKFLFRTLFLNGC" FT CDS 72..3407 FT /codon_start=1 FT /transl_table=1 FT /product="126kDa protein" FT /db_xref="GOA:Q8V702" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q8V702" FT /protein_id="BAB83987.1" FT /translation="MAHIQSTISNALLESVSGKNTLVNDLARRRMYDTAVDEFNARDRR FT PKVNFPKTISEEQTLLVTNAYPEFQITFYNTQNAVHSLAGGLRALELEYLMLQVPYGSP FT TYDIGGNFAAHLFKGRDYVHCCMPNLDIRDIMRHEGQKDSIEMYLSRLSRSNKVIPEFQ FT RAAFNRYAEAPNEVCCSKTFQDCRIHPPENSGRRYAISLHSLYDIPVHEFGAALISKDI FT HICYAAFHFSEALLLDQTEVTLNEIGATFKREGDDVSFFFADESTLNYNHKYKNILHYV FT VKSYFPASSRIVYFKEFLVTRVNTWFCKFTKVDTYILYKSVRQVGCDSDQFYEAMEDAF FT TYKKALAMFNTERAILRDTASVNFWFPKMKDMVIVPLFEGSITSKKMTRSEVIVNRDFV FT YTVLNHIRTYQAKALTYQNVLSFVESIRSRVIINGVTARSEWDVDKAILQPLSMTFFLQ FT TKLAALQDDIVMGKFRCLDKTTSELIWDEVGKFFGNVFPTIKERLVSRKILDVSENALK FT IKIPDLYVTWKDRFVAEYTKSEELPHLDIKKDLEEAEQMYDALSELSILRDADNFDIAK FT FKDMCKALCVNPDVAARVIVAVAENRSGLTLTFDKPTEENVAKALKSTASEAVVRLEPT FT SDEVMVNKFSIAERGKLPVCAESHGLTNANLEHQELESLNDFHKACVDSVITKQMASVV FT YTGSLKVQQMKNYVDSLAASLSATVSNLCKSLKDVVGYDSDSREKVGVWDVTLKKWLLK FT PAAKGHSWGVVLDYKGKMFTALLSYEGDRMVTESDWRRVAVSSDTMVYSDIAKLQNLRK FT TMRDGEPHEPTAKMVLVDGVPGCGKTKEILERVDLDEDLILVPGKQAAAMIRRRANSSG FT LIRATMDNVRTVDSFLMHPKPRTHKRLFIDEGLMLHTGCVNFLVLISGCDIAYIYGDTQ FT QIPFINRVQNFPYPKHFEKLQVDEVEMRRTTLRCPGDVNFFLQSKYEGAVSTTSTVQRS FT VSSEMIGGKGVLNSVSKPLKGKIVTFTQADKFELEEKGYKNVNTVHEIQGETFEDVSLV FT RLTATPLTLISKSSPHVLVALTRHTKSFKYYTVVLDPLVQIISDLSSLSSFLLEMYMVE FT AGGR" FT CDS 4891..5661 FT /codon_start=1 FT /transl_table=1 FT /product="28kDa protein" FT /db_xref="GOA:Q8V701" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q8V701" FT /protein_id="BAB83988.1" FT /translation="MAVSLRDTVKISEFIDLSKQDEILPAFMTKVKSVRISTVDKIMAV FT KNDSLSDVDLLKGVKLVKNGYVCLAGLVVSGEWNLPDNCRGGVSVCIVDKRMKRSKEAT FT LGAYHAPACKKNFSFKLIPNYSITSEDAEKHPWQVLVNIKGVAMEEGYCPLSLEFVSIC FT VVHKNNVRKGLRERILRVTDGLPIELTEKVVEEFVDEVPMAVKLERFRKTKKRVVGNSV FT NNKKINNSGKKGLKVEEIEDSVSDDESIASSSTF" FT CDS 5667..6146 FT /codon_start=1 FT /transl_table=1 FT /product="17kDa protein" FT /db_xref="GOA:Q8V700" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q8V700" FT /protein_id="BAB83989.1" FT /translation="MPYTINSPSQFVYLSSAYADPVQLINLCTNALGNQFQTQQARTTV FT QQQFADAWKPVPSITVRFPASDFYVYRYNSTLDPLITALLNSFDTRNRIIEVDNQPAPN FT TTEIVNATQRVDDATVAIRASINNLANELVRGTGMFNQAGFETASGLVWTTTPAT" XX SQ Sequence 6356 BP; 1914 A; 1116 C; 1507 G; 1819 T; 0 other; gtatgtttta atagttttcg acaacaacaa ttaaaacaaa aacaacaaat tacaaacaac 60 aaacaacaac aatggcacac atacaatcta caattagcaa cgcccttctt gaaagcgtga 120 gtggtaaaaa cactctcgtt aatgaccttg caagaaggcg catgtacgac acggccgtgg 180 acgaattcaa cgcccgcgac cgtagaccaa aggtcaactt tcctaaaact attagcgaag 240 aacaaacgct tctagtcacc aacgcgtacc cggagttcca gattaccttt tataatactc 300 aaaatgccgt acacagtttg gctggcggtt tgagagcatt agaattggaa tatctgatgc 360 tacaagttcc ctatggatca ccgacatatg atataggtgg gaacttcgca gcacatttgt 420 tcaaaggcag ggattacgtg cattgctgta tgcccaatct ggacatacga gatataatga 480 ggcacgaagg acaaaaagac tcaattgaga tgtatttgtc cagattgtct cgttccaaca 540 aggtaattcc tgagtttcaa agggcggctt ttaatagata tgcagaagct ccgaacgaag 600 tctgctgctc aaaaactttc caggattgtc gaatacatcc accagagaat agtggtagaa 660 gatacgctat ttctctgcac agtttgtatg atattcctgt gcatgagttt ggagctgcgt 720 taatatccaa ggacatacat atatgctatg cagccttcca tttttctgaa gcattattac 780 tagaccagac ggaggttacg cttaatgaaa taggcgcaac tttcaaaaga gaaggtgatg 840 atgtttcctt tttctttgct gatgaaagta ctttaaatta taatcataaa tacaaaaata 900 ttttgcatta tgtagttaaa tcttactttc ctgcttctag tagaatagtt tactttaagg 960 aatttttagt cactagggtt aatacttggt tttgtaaatt taccaaagta gatacctata 1020 ttctgtacaa gagtgtcaga caagtagggt gtgatagtga tcagttctat gaggcgatgg 1080 aggacgcctt tacttataag aaagccttgg ctatgttcaa cactgaaaga gcaatcttaa 1140 gagacacggc ttcggttaat ttttggtttc ccaagatgaa ggacatggtg atagtaccgc 1200 tgttcgaggg ttctattacc agcaaaaaga tgacaaggag tgaggtcatt gttaatcgtg 1260 acttcgttta tacagtgctt aatcatatca ggacatatca agccaaagcg ttaacttacc 1320 agaacgtatt atctttcgtg gaatctataa gatcccgcgt gataatcaat ggtgttactg 1380 ctaggtctga atgggatgta gataaagcaa ttcttcaacc cttgtcaatg actttcttct 1440 tgcagactaa gctggctgcg cttcaagatg atatagtaat gggaaagttt cggtgcttgg 1500 ataagaccac ttctgaactt atttgggatg aagtgggcaa attctttgga aacgttttcc 1560 ccactatcaa agagagattg gtgagcagga aaattttgga tgtgagtgag aatgctctga 1620 agatcaagat cccggatctg tatgtcacgt ggaaggacag gttcgtagct gagtatacca 1680 agtctgagga gttaccgcat ctggatatca agaaggactt agaagaagct gagcaaatgt 1740 acgacgcgtt atcggaatta tctatcctta gggatgctga taatttcgat atcgcgaagt 1800 tcaaagacat gtgcaaggct ttatgtgtta atcctgatgt ggcagcacga gtaatcgttg 1860 cagtggccga gaatagaagc ggtttgactc ttacttttga taagccaacc gaggagaatg 1920 tggctaaggc tcttaaaagc acggcgtctg aggccgtggt gcgtcttgaa ccgacatctg 1980 atgaggtgat ggtaaataaa ttttctattg ctgagagagg gaaattgccc gtgtgtgctg 2040 aaagtcatgg tttgacgaat gctaacttag agcaccagga gttggagtct ctcaacgatt 2100 tccataaagc ttgcgtggat agtgtgatta caaagcaaat ggcatcggtt gtctatactg 2160 gctcactcaa agttcaacaa atgaagaact atgtggacag tttggcagct tcgttgtccg 2220 ccactgtatc aaatctatgc aagtcattaa aggatgttgt tgggtatgat tctgattcca 2280 gggagaaagt tggtgtttgg gatgtcactt tgaaaaagtg gctccttaaa ccggcggcaa 2340 aaggccattc atggggagtt gtcctggatt acaaagggaa aatgtttacc gcacttctat 2400 cttatgaagg agatagaatg gtgactgaga gcgactggag gagggtggct gtctcatctg 2460 atacgatggt atattctgat attgcgaagc tccaaaatct gaggaaaaca atgagagacg 2520 gtgaacccca cgaacctact gcaaagatgg tacttgtgga tggggtgcct ggttgtggaa 2580 agacaaagga gattttggaa agagttgatc ttgatgagga tttgatcttg gttcctggaa 2640 aacaagctgc tgctatgatc agaagaaggg ctaattcatc tggactgata agagccacta 2700 tggacaatgt gagaacggta gattcatttc taatgcatcc aaaaccgcga acgcacaaga 2760 ggcttttcat tgatgaaggg ttgatgctgc acaccggttg tgttaacttc ctggtgctta 2820 tctctggttg cgacatcgca tacatttacg gagatacaca gcagattcct ttcattaaca 2880 gagttcagaa tttcccgtat cctaaacatt ttgagaagct gcaagtggat gaagttgaga 2940 tgaggaggac cacgctgagg tgcccaggtg atgtgaattt tttcctacaa tcgaaatacg 3000 aaggagcggt gtcaaccact tcaactgtac aacgatcagt ctcatctgag atgataggag 3060 gtaagggagt actgaacagt gtttccaaac cactgaaagg gaaaattgta actttcactc 3120 aggctgataa atttgagtta gaggagaagg gctataagaa tgtgaacacc gttcatgaga 3180 tccaaggaga aacctttgaa gatgtgtcgc tggtcagatt gacagcaact ccactgactc 3240 tgatttccaa gtcttccccg catgttctag tcgccctgac tagacacaca aagagcttca 3300 aatattacac cgtagtgtta gatcctttag tacagataat tagtgatttg tcttctttaa 3360 gctccttcct tttagaaatg tatatggtag aagcaggtgg tagatagcaa ttacagatgg 3420 atgcagtgtt caaaggtcat aatctctttg tggcaacacc taaatcagga gactttccag 3480 atctgcagtt ctattatgat gtatgtctcc ctggtaacag tactatactt aacaagtatg 3540 atgctgttac catgaggtta cgcgataata gtcttaatgt gaaggattgt gttcttgatt 3600 tttccaaaag cattccgatg ccaaaggagg tgaaaccatg tctagagcca gttttgcgta 3660 ccgcggcaga accgccaagg gttgcaggac tactcgaaaa tctggttgca atgattaaaa 3720 gaaatttcaa cgcaccagac ctgacgggga cgattgacat tgagagcacc gcatctgttg 3780 tagtagataa gttttttgat agttattttt taaaaaaaga aaaatacaca aaaaatattg 3840 ctggagtgat gacgaaggat tcaatgatga gatggttggg aaaacaggag agaagtacta 3900 tcggacagtt ggctaactac aattttgtag atctgccggc catcgaccag tataagcaca 3960 tgatcaaggc tcaaccaaaa cagaaattgg acctttcaat tcagaatgaa taccctgctc 4020 tgcaaacaat tgtctaccat tcaaagcaga tcaacggtat ttttggcccg gttttttcag 4080 agcttacaag gttgctgctc gaggcagttg attctcagaa gtttcttttc tttactagga 4140 aaactccaga acagattcaa gaatttttct cggatctcga ctcgcacgtt cctatggacg 4200 tgttagaact ggacatttct aagtatgata agtcgcagaa cgagtttcat tgtgctgtag 4260 agtatgaaat atggaaaaga ctgggtctca atgagttttt ggccgaagtg tggaaacaag 4320 gacacaggaa aacaactttg aaggattaca ttgctggaat caagacatgt ctgtggtatc 4380 aaaggaaaag cggtgatgtg actactttca tcggcaatac tgttataata gcagcttgct 4440 tgggctcaat gttacctatg gaaaaggtca taaaaggtgc cttttgtgga gatgactccg 4500 ttttgtattt cccgaagggt ttggatttcc ctgacattca gtcatgtgcc aatctcatgt 4560 ggaattttga ggccaaactg tacagaaaga agtacggtta cttttgtggt aggtacatca 4620 tacaccatga taagggagca atagtgtatt atgatccttt gaagttgatc tccaaactgg 4680 gggcaaaaca tatcaaggat tatgatcact tggaagagtt gagggtgtct ttgtgtgacg 4740 ttgcttgttc gctcggaaac tgtgcttact ttccgcagct gaacgcagct atcaaggagg 4800 ttcataaaac cgcgattgat ggttcgtttg cttttaattg tgttaacaaa tttttgtgtg 4860 ataaattttt atttagaact ttgtttttaa atggctgtta gtctcagaga tactgtcaaa 4920 attagcgagt ttattgatct ttcgaaacag gatgagatac ttccggcatt catgactaaa 4980 gtcaagagtg ttagaatatc gactgtggac aagattatgg ctgttaagaa tgatagtctt 5040 tctgatgtag acttacttaa aggtgttaag ttagttaaga atgggtatgt gtgcttagct 5100 ggtttggtag tgtctgggga gtggaatctc ccggataact gccgtggtgg tgtcagtgtt 5160 tgtattgtag ataagagaat gaaaaggagt aaggaagcaa cgctgggtgc atatcacgcc 5220 cctgcttgca aaaagaattt ttcttttaag ctaatcccta attattcaat aacatccgag 5280 gatgctgaga agcacccgtg gcaggtgtta gtgaatatca aaggagtggc tatggaagaa 5340 ggatactgtc ctttatcttt ggagttcgtt tcaatttgtg tagtacataa aaataatgta 5400 aggaaaggtt tgagggaacg tattttgaga gtaacagacg gcttgccgat tgaactcact 5460 gaaaaagttg ttgaggagtt cgtggatgaa gtaccaatgg ctgtgaaact cgaaaggttc 5520 cggaaaacaa aaaagagagt ggtaggtaat agtgttaata ataagaaaat aaataatagt 5580 ggtaagaagg gtttgaaagt tgaggaaatt gaggatagtg taagtgatga cgagtctatc 5640 gcgtcatcga gtacgtttta gtcaatatgc cttatacaat caactctccg agccaatttg 5700 tttacttaag ttccgcttat gcagatcctg tgcagctgat caatctgtgt acgaatgcat 5760 tgggtaacca gtttcaaacg caacaagcta ggacgacagt ccaacagcaa tttgcggatg 5820 cctggaaacc tgtgcctagc ataacagtga gatttcctgc atcggatttc tatgtttata 5880 gatataattc gacgcttgat ccgttgatca cggcgttatt aaatagcttt gatactagaa 5940 atagaataat agaggttgat aatcaaccag caccgaatac tactgaaatc gttaacgcga 6000 ctcagagggt agacgatgcg actgtagcta taagggcttc aatcaataat ttggctaatg 6060 aactggttcg tggaactggc atgttcaatc aagcaggctt tgagactgct agtggacttg 6120 tttggaccac aactccagct acttagctat tgttgtgaga tttccaaaaa taaagtcgct 6180 gaagacttta aattcagggt ggctgatacc aaaatcagca gtggttgttc gtccacttaa 6240 atataacgat tgtcatatct ggatccaaca gttaaaccat gtgatggtgt atactgtggt 6300 atggcgtaaa acatcggaga ggttcgaatc ctcccctaac cgcgggtagc ggccca 6356 //