ID   AB076518; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB076518;
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DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:Cal1.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
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RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
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DR   MD5; 3cd143bdba21e8c611d667286d7cc947.
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FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Cal1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="polyprotein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8JWU5"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JWU5"
FT                   /protein_id="BAC02854.1"
FT                   /translation="AGQTLDADLTDEQKQAEKERKERERAEKERERQKQLALKKGKNAS
FT                   LEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 864 BP; 287 A; 185 C; 225 G; 167 T; 0 other;
     gcaggtcaaa cacttgatgc agacctaacg gacgagcaga agcaagcaga aaaggagagg        60
     aaagagagag agagagcaga gaaagagcgc gaaaggcaga aacaattagc gcttaagaaa       120
     ggcaaaaacg catcactaga ggaaggcgaa cgtgacaacg aagtgaacgc cggaacctct       180
     ggaactttca gtgtgcctag gctcaaaagc ctaacgagca aaatgcgagt gccaaagtat       240
     gagaaacgag ttgctctcaa cctcgatcat ctgattctat acacgccgga gcagacggat       300
     ctatccaaca cgcgttcaac gcgaaagcag tttgacacct ggtttgaagg tgtaatggct       360
     gactacgagc taacggagga taaaatgcaa ataattctca atggtttaat ggtctggtgc       420
     attgagaatg gaacctcccc gaacataaac ggaatgtggg tgatgatgga cggtgatgat       480
     caggtggaat tcccgatcaa accgctcatt gaccacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgata tgagcttagc ccggtacgca       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaggc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aataatttgt tcggcttgga tggtaacgtc       780
     ggcacaacgg tagagaacac ggaaaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gtta                                              864
//