ID   AB076511; SV 1; linear; genomic RNA; STD; VRL; 864 BP.
XX
AC   AB076511;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus CP gene for polyprotein, partial cds, isolate:TD88J.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-864
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 65a0974743c8c00ac676ea3108ce8449.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..864
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="TD88J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>864
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="polyprotein"
FT                   /note="coat protein"
FT                   /db_xref="GOA:Q8JWV2"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JWV2"
FT                   /protein_id="BAC02847.1"
FT                   /translation="AGETLDAGPTDEQKQAEKERKERERAEKEREKQKQLALKKGKNAA
FT                   LEEGERDNEVNAGTSGTFSVPRLKSLTSKMRVPKYEKRVALNLDHLILYTPEQTDLSNT
FT                   RSTRKQFDTWFEGVMADYELTEDKMQIILNGLMVWCIENGTSPNINGMWVMMDGDDQVE
FT                   FPIKPLIDHAKPTFRQIMAHFSDVAEAYIEKRNQDRPYMPRYGLQRNLTDMSLARYAFD
FT                   FYEMTSRTPIRAREAHIQMKAAALRGANNNLFGLDGNVGTTVENTERHTTEDVNRNMHN
FT                   LLGVKGL"
XX
SQ   Sequence 864 BP; 288 A; 181 C; 227 G; 168 T; 0 other;
     gcaggtgaaa cacttgatgc aggcccaacg gatgagcaga agcaagcaga aaaggagagg        60
     aaagagagag agagagcaga aaaagagcga gagaagcaaa agcagctagc gcttaagaaa       120
     ggcaaaaacg cagcactaga ggaaggcgaa cgtgacaacg aagtgaacgc cggaacctct       180
     ggaactttta gtgtgcctag gctcaaaagc ctaacgagca aaatgcgagt gccaaaatac       240
     gagaaaagag tagctctcaa tcttgatcat ctgattctgt acacgccgga gcagacggat       300
     ctatccaata cgcgttcaac acggaagcag tttgacacct ggtttgaagg cgtcatggct       360
     gactacgagc taacggagga taaaatgcaa ataattctca atggtttaat ggtctggtgc       420
     attgagaatg gaacctcccc aaatataaac ggaatgtggg tgatgatgga cggtgatgat       480
     caggtggaat tcccgatcaa accgctcatt gatcacgcca aacccacatt taggcagata       540
     atggcccatt tcagtgacgt agctgaagcg tacattgaaa agcgtaacca agaccgacca       600
     tacatgccac gatatggtct tcagcgcaat ttaaccgaca tgagcttagc tcgctacgcg       660
     tttgatttct atgaaatgac ttctagaact ccaatacgtg cgagagaggc acacatccag       720
     atgaaagcag cagcactgcg tggcgcaaat aataatttgt tcggcttgga tggtaacgtc       780
     ggcacaacgg tagagaacac ggaaaggcat acgaccgagg acgttaatcg gaacatgcat       840
     aacttacttg gcgttaaggg gtta                                              864
//