ID   AB076478; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076478;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:CHN5.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 8d8084a0330fe358f38e6435a88b5ed0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHN5"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JWY5"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JWY5"
FT                   /protein_id="BAC02814.1"
FT                   /translation="MAAVTFASAITNATINKPALTGMVQFGSFPPMPLRSTTVTTAATS
FT                   VAQPKLYTVQFGSLDPVVVKGRAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSDAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RIAQQPIILKWEPKLSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKKRMVHRICKMND
FT                   QGIDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKEQTKFARIQVAHLLGKRARRDLS
FT                   TGMEENHFIDILSEYSGYKTTINPGVICAGWSGIVVRNGILAQRRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIMHF"
XX
SQ   Sequence 1086 BP; 341 A; 235 C; 293 G; 217 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca ctatcaataa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaatgccat tgcgatcaac caccgtcacc       120
     acagccgcca cttcggtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagggtag agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa gcctagatcg       300
     gatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcgtatgga attgctgaga acgagaaagt tgtgatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtatagcgca gcaaccaatt atactaaagt gggagcccaa attgagcggg       540
     atctcaattg gaggagggct ctccgcgagc gcgatcgaag tggaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aagaggatgg tgcacagaat atgcaagatg       660
     aacgaccaag gaattgacat gttgacacga tccctggtta agattttcaa gactaagagt       720
     gccaacattg aatacatcgg gaagaaatcg atcaaggttg atttcatcag aaaagagcag       780
     acgaaattcg caagaatcca agtagcacac ttactcggga agcgagcacg tcgcgacttg       840
     tcaactggaa tggaagaaaa ccattttatt gatattctca gcgagtactc aggttacaaa       900
     acaaccatta atccaggagt gatttgcgca ggttggagtg gcatagttgt tagaaatgga       960
     attctagccc agagacgaag cagaagccca tcagaggcct ttgtaattag gggtgagcac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacgagga caatgagtca caagattatg      1080
     cacttt                                                                 1086
//