ID   AB076474; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076474;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:CHN1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; e92b4e3bd302ce9cbb7ca6d248d970c0.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CHN1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JWY9"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JWY9"
FT                   /protein_id="BAC02810.1"
FT                   /translation="MAAVTFATAITNTTASRSATTGMVQFGNFPPVPLRSTIATTDVTP
FT                   VAQPKLYTVQFGSLDPIVVKGKAGSSAKATCQQPSSEINASLKEAAALEVAKPKPNAVL
FT                   RMHEEMNKERALFLDWETSLTRRSYGIADNEKVIMTARGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPKLSTISIGGGPSANMIEAEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNRKIINPGVVCAGWSGIIIRNGILTQKRSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 354 A; 234 C; 282 G; 216 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcag atcagcaacc        60
     accggaatgg tgcaatttgg gaatttccca ccagtgccgt tgcgatccac catcgctacc       120
     acagatgtca ccccagtggc acaacccaag ctgtacacag tgcagttcgg aagccttgac       180
     ccgattgtcg tcaagggtaa agcagggtcc tctgctaagg caacctgcca gcagcctagc       240
     agtgaaataa atgctagcct caaggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgt taaggatgca cgaggaaatg aacaaggaga gagcactctt cttagactgg       360
     gaaaccagtt taacaaggcg ctcatatggc attgctgaca acgagaaagt catcatgaca       420
     gctcgtggtg ttagcaagat agtgcctagg agctcaaggg cgatgaaaca aaagcgcgca       480
     agagaaaggc gcagggcaca acaaccaatt gtgctgaaat gggagcccaa gttgagcaca       540
     atctcaattg gaggaggacc ctccgcaaat atgattgagg cagaagaagt tcgcacgaag       600
     tggccgttac ataaaacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaatattg agttcattgg aaggaagtcc attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagtttg ccagagtaca agtagtgcat ttgcttggaa agcgagcaca gcgcgacctg       840
     ttgactggtg cagaagaaaa ccacttcatt gacaccctaa gcacctattc aggaaatagg       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattattat cagaaacggc       960
     atcttgactc agaagcggag cagaagtcct tcgcaagctt ttgtgattcg aggggaacac      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaaag tgatgagcca caaaatcata      1080
     cactat                                                                 1086
//