ID   AB076472; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076472;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NPL4.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 7f3f0c40b793f0c3d5aa77f0b8feb112.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NPL4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JWZ1"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JWZ1"
FT                   /protein_id="BAC02808.1"
FT                   /translation="MAAVTFASAITNATTNKPALTEMVQFGNFPPMPLRSTTVTTVATS
FT                   VAQSKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPKLSTISIGRRPSANMIEAEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKPIKVDFVKKEQTKFARITVVHLLRKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNRKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 349 A; 233 C; 286 G; 218 T; 0 other;
     atggcagcag ttacattcgc gtcagctatc accaacgcca ccaccaacaa accagcactc        60
     accgaaatgg tacagtttgg gaatttccca ccaatgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaatccaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagttg ttaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagacca       300
     aatgccgtgt taaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcgtatgga attgctgaga acgagaaggt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgtgca       480
     agagaaaggc gcagggcaca acaaccaatt gtgctgaaat gggagcccaa gttgagcaca       540
     atctcaattg gaagaagacc ctccgcaaac atgattgagg cagaagaggt tcgcacgaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aacgatcaag gaattgatat gttaatgcgt tctttgatca aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagccg attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagttcg ccagaattac agtagtgcat ttgctccgga agcgggcaca acgtgacctg       840
     ttgactggtg cagaagagaa ccacttcatt gacaccctaa gcacctactc aggaaatagg       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attttgactc aaaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaaggcaagt tgtatgacgc cagggttaag gtcacaaagg tgatgagcca caaaatcata      1080
     cactat                                                                 1086
//