ID   AB076462; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076462;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NX158.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; e9ff1b5da254c7884370b3d8645e4862.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NZ158"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX01"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX01"
FT                   /protein_id="BAC02798.1"
FT                   /translation="MAAVTFASAITNAIINKPTSAGMVQFGSFPPMPLRSTTITTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETGLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPITLKWEPKLSEFSIGGRSSASAIEAEEVRTKWPLHKTLSLKKRMVHKTCKMSD
FT                   QGVDMLIRSLVKIFKAKSANIEYIRKKSIKADFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   AGVEENHFIDILSEYSGNKTVINPGVVCAGWSGVIVRNEVLTQKRSRSPSKAFVIRGEH
FT                   EGKLYDARIKITKTMSLKIVHF"
XX
SQ   Sequence 1086 BP; 344 A; 238 C; 288 G; 216 T; 0 other;
     atggcagcag tcacatttgc atcagcaatc accaacgcca tcatcaacaa acctacatcc        60
     gccggaatgg tacagttcgg gagcttccca ccaatgccat tacgttccac cactatcacc       120
     acagtcgcca ctccagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccaagtcg       300
     agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaaaccggtc taaagagacg ctcgcatgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggcg ttagcaagat agtgcccaga agttcaaggg cgatgaagca aaagcgcgca       480
     agagagaggc gtagagcaca gcaaccaatc accctaaaat gggagcccaa attgagtgag       540
     ttctcaattg gaggaagatc ttctgcgagt gcaattgaag cagaggaagt tcgcacaaag       600
     tggccacttc acaaaacact gtcattgaag aagaggatgg tgcacaagac atgcaagatg       660
     agcgatcaag gagttgatat gttaatacgc tctctggtta agatcttcaa ggctaagagc       720
     gccaacatcg agtacatcag gaagaagtca attaaggctg attttattag gaaagagcga       780
     acgaagttcg caagagttca agtagcacac ctgctcggaa agagagcaca gcgcgatttg       840
     ttagccggag tggaagagaa ccactttatt gacattctca gcgagtattc aggcaacaaa       900
     acggtcataa acccaggagt agtatgtgcc ggttggagcg gagtgatcgt taggaacgaa       960
     gttctaactc agaaacggag cagaagtcca tcaaaagctt ttgtaatcag gggtgagcac      1020
     gaaggcaagt tgtatgatgc cagaatcaag atcacaaaaa cgatgagtct taagatcgtg      1080
     catttt                                                                 1086
//