ID   AB076461; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076461;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:USA4.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 2d0dc69b8983d5d8ec51e044dfc09e0a.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="USA4"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX02"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX02"
FT                   /protein_id="BAC02797.1"
FT                   /translation="MAAVTFASAITNAITNKPAPTGMVQFGSFPPMPLRSTTVTTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGRGLSASAIEAEEVRTKWPLHKTPSMKKRMVHKPCKMND
FT                   QGIDMLTRSLVKIFKTKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMGENHFIDILSGYSGNKATINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 352 A; 241 C; 285 G; 208 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca ttaccaacaa accagcaccc        60
     accggaatgg tacagttcgg gagtttccca ccaatgccat tgcgatccac caccgttacc       120
     acagtcgcca ctccagtggc gcaacctaaa ctgtacacag tgcagtttgg gagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc tttgccaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgctgtgc tgagaatgca cgaggaagca aacaaggaga gagcactctt tctggactgg       360
     gaggctagtc tgaagagaag ctcgtatgga attgctgaga acgagaaggt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagccaaa attgagcggg       540
     atctcaattg gaagaggact ctccgcgagc gcgatcgaag cagaagaagt tcgcacaaag       600
     tggccacttc acaagacacc gtcaatgaag aagaggatgg tgcacaaacc atgcaagatg       660
     aacgaccaag gaattgacat gctgacacga tccctggtta agattttcaa gactaagagt       720
     gccaacattg agtacattgg aaagaagtcg attaaagtcg atttcattag aaaagagcgg       780
     accaaattcg caagaatcca agtagcacac ttactcggaa agcgagcaca gcgtgacttg       840
     tcaactggaa tgggggaaaa ccactttatt gacattctca gcggatactc aggtaacaaa       900
     gcaaccataa atccaggagt agtttgcgca ggttggagtg gcatagttgt tagaaatgga       960
     attctaaccc aaaaacgaag caggagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc taggataaaa gtcacgaaaa caatgagcca caagattgtg      1080
     cacttt                                                                 1086
//