ID   AB076460; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076460;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:USA1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; a9131b6b777d233532105c7ad42c72e5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="USA1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX03"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX03"
FT                   /protein_id="BAC02796.1"
FT                   /translation="MAAVTFASAITNATINKPASTGMVQFGSFPPMPLRSTTVTTVATS
FT                   VAQPRLYTVQFGSLDPVVVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIADNEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRVQQPILLKWEPKLSGFSIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRTCKMND
FT                   QGVDMLTRSLVKIFKAKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTAINPGVVCAGWSGVVVRNEILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 339 A; 238 C; 293 G; 216 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca ccatcaacaa accagcatcc        60
     accggaatgg tacagtttgg gagcttccca ccaatgccat tgcgatccac caccgttacc       120
     acagtcgcca cttcagtggc gcaacctaga ctgtacacag tgcagtttgg aagtcttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgccgtgt tgagaatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggccagtt tgaagagaag ctcgtatggc attgctgata acgagaaggt tgtaatgaca       420
     actcgtggcg tcagtaagat agtgcccaga agttcacggg caatgaagca aaagcgcgca       480
     agagagagac gtagagtgca gcaaccaatt ctactaaagt gggagcccaa attgagcggg       540
     ttctcaattg gaggagggct ctccgcaagc gcgattgaag cagaagaagt tcgcacaaag       600
     tggccacttc acaagacacc gtcaatgaag aagaggacgg tgcacagaac atgcaagatg       660
     aacgaccagg gggttgacat gttgacacga tccctggtta agatttttaa ggctaagagt       720
     gccaacattg agtacatcgg aaagaagtcg atcaaggtcg atttcatcag gaaagagcga       780
     acgaaattcg caagaatcca agtggcacac ctactcggga agcgagcaca gcgtgatttg       840
     tcaactggaa tggaagagaa ccactttatt gacattctca gcgggtactc aggtaacaaa       900
     acagccataa atccaggagt agtttgcgca ggttggagtg gcgtagtcgt tagaaatgaa       960
     attctaaccc agaaacgaag caggagtcca tcagaggcct ttgtaattag aggtgaacac      1020
     gaaggtaagt tgtatgatgc caggatcaaa gtcacgaaga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//