ID   AB076453; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076453;
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DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:RUS2.
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KW   .
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OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
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DR   MD5; 00dad11424ed46932e37aba767f14760.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="RUS2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX10"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX10"
FT                   /protein_id="BAC02789.1"
FT                   /translation="MAAVTFAPAITNATTSKSASTGMVQFGSFPPVPLRSTVAITAATP
FT                   VAQPRLYTVQFGSLDPVVVKGGAGSSAKATRQQPSIEIDASLREAAALEVAKPKPNAVV
FT                   RMHEEMNKERALFLDWEASLQRCSYGIAENEKVVMTTRGASKIVLRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKPSDLSIGGRPSANTIEAEEIRTKWPLHKTPSMKRKTIHKPCRMNK
FT                   QGIDMLICSLIKIFKAKNANIEYTGRKSIKVDFIRKEKMRFARVQVEHLLGRRAQRDLS
FT                   TGGEENHFIDILRCYSGSKKAIKPGVICAGWSGVVVRYGALTQKRSRSPEKAFVVRGEH
FT                   EGKLYDARIKVTKTMSHKIIHF"
XX
SQ   Sequence 1086 BP; 360 A; 244 C; 285 G; 197 T; 0 other;
     atggcagcag taacattcgc accagcaatc accaacgcca ccaccagcaa atcagcatcc        60
     accggaatgg tgcaatttgg gagtttccca ccagtaccat tacgatccac cgtcgctatc       120
     acagccgcca ccccagtggc gcaacctagg ctgtacacag tacagtttgg aagccttgac       180
     ccagtagtcg tcaagggcgg agcagggtcc tctgctaagg caacccgcca gcagcctagc       240
     attgaaatag atgctagcct cagggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgg tgaggatgca cgaagaaatg aacaaggaga gagcactttt tctggactgg       360
     gaagccagct tacaaagatg ttcgtatggc atcgccgaga acgagaaagt cgtgatgaca       420
     actagaggag ccagcaagat agtgctcaga agttcaaggg caatgaaaca gaagcgtgca       480
     agagaaagac gcagggcgca acagccaata atcttgaaat gggagccgaa accgagtgat       540
     ctctctattg ggggaagacc ctctgcaaac acgattgaag cggaggaaat ccgcaccaag       600
     tggccactac acaagacacc atcaatgaag aggaagacga tacacaagcc gtgtaggatg       660
     aacaagcaag gaattgacat gttaatatgc tccctgatta agatctttaa ggcaaagaac       720
     gccaacatcg agtacacagg aagaaaatcc atcaaggtgg atttcatcag gaaggagaag       780
     atgaggttcg ccagagtcca agtagaacat ctacttggga ggagagcgca acgtgatcta       840
     tcaactggag gagaagaaaa tcacttcatt gacattctta gatgctactc agggagcaag       900
     aaagccataa agccaggagt gatatgtgct ggttggagcg gagttgtagt acgatatgga       960
     gctttaaccc agaaacggag tagaagcccg gaaaaagctt ttgtagttag aggcgagcac      1020
     gaaggcaaac tgtatgatgc tagaatcaag gttacaaaaa caatgagcca caagatcatt      1080
     catttc                                                                 1086
//