ID   AB076446; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076446;
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DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:IS1.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
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DR   MD5; bf83ce0c5cfed061d3b002a8399dc857.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="IS1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX17"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX17"
FT                   /protein_id="BAC02782.1"
FT                   /translation="MAAVAFASATTNAVINKPTSTGMVQFGSFPPVPLRSTIVTTVVTP
FT                   VVQPNLYTVQFGSLDPVVVKGVAGSSAKETRQQLSVKEDVNLRGTAALEVAKPKPSIEE
FT                   KMQEEARKERAIFQEFENRLGRRSYGIAENEKIIMTARGFSKIVPKSKKEMKYKRAKER
FT                   RNSQQPIVLEWDSTVSKISIGGGPSANAIEVEEARIKWPLHKTPSMKEKTVHRACRMND
FT                   QGIDMLMRSLIKIFKAKDASIEYTGRKSIKVDFVKKERTKFARVQVAHLLGKRLQRDLS
FT                   TGVEENRFIDILSEYSGSRRVINPGVICAGWSGIIVKNGVLVQKQSRSPSKAFIIRGEH
FT                   EGKLYDARIKVTKMMSHKIVHF"
XX
SQ   Sequence 1086 BP; 355 A; 217 C; 283 G; 231 T; 0 other;
     atggcagcag tcgcatttgc atcagcaacc accaatgccg tcatcaacaa accaacatcc        60
     accggaatgg tgcaatttgg gagcttccca ccagtgccat tacgatccac aattgttact       120
     acagtcgtca caccagtggt acagcccaat ttgtacacag tgcaatttgg aagccttgac       180
     ccagtagtcg tcaagggtgt agcagggtcc tctgctaagg aaacccgcca gcagcttagc       240
     gttaaagaag acgttaacct cagggggacc gcggctttgg aggttgcaaa acccaaaccg       300
     agtattgagg aaaagatgca ggaggaagca cgcaaagaga gagcgatttt ccaggaattt       360
     gagaacagac ttgggaggcg ctcatatggt atcgctgaaa atgagaagat catcatgaca       420
     gctcgtggtt tcagcaaaat agtacccaag agcaagaagg aaatgaagta caagcgtgcc       480
     aaagagaggc gcaattcaca acagccaatt gtgcttgaat gggattctac ggtcagtaag       540
     atctcaattg gaggagggcc ctctgctaat gcaatagagg tagaagaggc tcgcataaag       600
     tggccgctac acaagacacc gtcaatgaag gaaaagacgg tacatagagc gtgcagaatg       660
     aatgaccagg gaattgacat gctgatgcgt tccttgatca aaatcttcaa ggcaaaggac       720
     gccagcattg aatacactgg acgaaaatct attaaagtag actttgtcaa gaaagagcga       780
     acaaaatttg ctagagtcca agtggcgcat ctacttggaa agagattaca gcgtgacttg       840
     tctactggag tggaagaaaa tcgctttatc gatattttga gcgaatattc aggtagcagg       900
     agagttataa acccaggagt gatatgcgct ggctggagtg gaatcattgt taagaatgga       960
     gttctagtcc agaagcagag cagaagtccg tcaaaagcgt tcataatcag aggtgagcac      1020
     gaaggtaaat tgtatgacgc caggattaaa gttacaaaga tgatgagcca taagattgtg      1080
     cacttt                                                                 1086
//