ID   AB076444; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076444;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:Rn98.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
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DR   MD5; aa6a20471c1593b76b3a08d727dd866a.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Rn98"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX19"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX19"
FT                   /protein_id="BAC02780.1"
FT                   /translation="MAAVSFAPAITNTITSKSASTGMVQFGNFPPVPLRSTVAITVATP
FT                   VAQPKLCTVQFGSLDPVVVKGGAGSSAKATRQQPNGEIDVSLREAAALEVAKPKPNAVL
FT                   RMHEEINKERALFLDWETSLKRRSYGIAENEKIIMTTHGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPKLSEFSIGGGPSANTIEAEEFCVKWPLHKTPSMKKKTVHKVCRMNN
FT                   QGIDMLMRSLIKIFKAKSANIEYTGRKSIKIDFIKKERAKFARVQVAHLLGKRAQRDLS
FT                   TGVEENHFIDVLSGYSGNKKAINPGMVCAGWSGIIIRDGVLTQKRSRCPSKAFVVRGEH
FT                   EGKLYDARIKVTKTMSHKITHF"
XX
SQ   Sequence 1086 BP; 353 A; 241 C; 281 G; 211 T; 0 other;
     atggcagcag tatcattcgc accagcaatc accaacacca tcaccagcaa atcagcatcc        60
     accggaatgg tgcaatttgg gaatttccca ccagtaccat tgcgatccac cgtcgctatc       120
     acagtcgcca caccagtggc gcaacccaag ttgtgcacag tgcaatttgg aagccttgac       180
     ccagtagtcg tcaagggtgg agcagggtcc tctgctaagg caacccgcca gcagcctaac       240
     ggtgaaatag acgttagcct cagggaagcc gcagctttgg aggttgcaaa acccaaaccg       300
     aatgccgtgt tgaggatgca cgaagagata aacaaggaga gagcgctctt cttagactgg       360
     gaaaccagtt tgaagagacg ttcatatggc atcgctgaga atgagaagat catcatgacg       420
     actcatggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggaaagac gtagagcaca acaaccaatt gtactgaagt gggagcccaa gctgagcgaa       540
     ttctcaattg gtggaggacc ctctgcaaac acaattgaag cggaggaatt ctgcgtgaaa       600
     tggccgctac acaagacacc gtcaatgaag aaaaagacgg tgcacaaggt atgcaggatg       660
     aacaaccagg gaatcgatat gttgatgcgc tccttgatta agatcttcaa ggcaaagagt       720
     gccaacattg aatacactgg gaggaagtcc attaaaatag acttcatcaa gaaagagcga       780
     gcaaaatttg ctagagttca agtagcgcac ctacttggaa agagagcaca gcgtgacttg       840
     tcaactggag tggaggagaa ccactttatt gatgttctta gcggctactc aggcaacaag       900
     aaggccataa atccaggaat ggtatgtgcc ggttggagcg gaatcatcat cagagacgga       960
     gttctaaccc aaaaacggag tagatgtcca tcgaaagctt ttgtggtcag gggtgaacat      1020
     gaaggcaaat tatatgatgc caggattaag gtcacaaaaa caatgagtca caagattaca      1080
     cacttt                                                                 1086
//