ID   AB076442; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076442;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:Cal1.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 040f592b24e2e6c658d58f553a3b42c9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Cal1"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX21"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX21"
FT                   /protein_id="BAC02778.1"
FT                   /translation="MAAVTFAPAITNTITSKPASTGMVQFGNFPPVPLQTTTATTVTTP
FT                   VVQPKLYTVQFGSLDPVVVKGGPGSSAKVTRQQPSIATDASLREAAALEVAKPKPNAVL
FT                   RMHEEANKERALFLDWETSLKRQSYGIAENEKVVMTTRGISKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPQLSTLSIGGGPAANVIEAEEVRTKWPLHKTPSMKKKTVFKACRMSN
FT                   QGIDMLMRSLIEIFKAKNATIEYTAKKSIYVDFIRKERTKFARVQVAHLLGKRAQRDLL
FT                   TGVEENHFIDTLSGYSGNKGVISPGVVRAGWSGIIVRNGVLTQNQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSLKIVHY"
XX
SQ   Sequence 1086 BP; 336 A; 265 C; 287 G; 198 T; 0 other;
     atggcagcag tcacattcgc accagcaatc accaacacca ttaccagcaa accagcatcc        60
     accggaatgg tacaatttgg gaatttccca ccagtgccat tgcaaaccac caccgctacc       120
     acagtcacca ccccagtggt gcaacctaaa ctgtacacgg tacagtttgg aagccttgac       180
     ccagtagtcg tcaagggtgg accagggtcc tctgctaagg taacccgcca gcagcctagc       240
     attgcaacag atgctagcct cagggaagcc gcagctttgg aggttgcaaa acccaagccg       300
     aatgctgtat tgagaatgca cgaagaggca aataaagagc gagcgctctt cttggactgg       360
     gaaaccagtc tgaaaaggca atcgtatggc attgctgaga acgagaaagt cgtgatgaca       420
     actcgtggca tcagcaagat agtgcccaga agttcacggg cgatgaagca aaagcgcgcg       480
     agggagaggc gcagggcaca acaaccaatt gtgctaaaat gggagccaca actgagcaca       540
     ctctccattg gaggagggcc tgccgcaaat gtaatcgagg cggaggaagt gcgcacaaag       600
     tggccactac acaaaacacc gtcaatgaag aaaaagacgg tgttcaaggc gtgcagaatg       660
     agcaaccaag gaattgacat gctaatgcgt tccttgatcg agatcttcaa ggcgaagaac       720
     gccaccatcg aatacactgc aaagaagtct atctacgtag acttcatcag aaaggagcga       780
     acaaagtttg cccgagttca ggtggcacat ctacttggta aacgagcaca acgtgacctg       840
     ttgactggag tggaagaaaa ccacttcatt gacactctca gtggttactc aggtaacaag       900
     ggagtcataa gcccaggggt agtgcgtgcc ggctggagtg gaataatcgt taggaatgga       960
     gttctcactc agaatcagag caggagtcca tcgcaagcct ttgtgatcag aggcgaacat      1020
     gaaggcaaac tgtacgatgc cagggtcaaa gtcacgaagg tcatgagcct caagatcgtg      1080
     cattat                                                                 1086
//