ID   AB076441; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076441;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:Al.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; e80ff69fe1149c62c2557b9c6fec2390.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Al"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX22"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX22"
FT                   /protein_id="BAC02777.1"
FT                   /translation="MATVAFASAITNAITNKQTSTGMVQFGSSPPVPLRSTTAIPVATP
FT                   VTQPKLYTVQFGSLDPVVVKGVAGSSAKETRRQLNVKEDVNLRETAALEVVKPQPNIVA
FT                   RMHEEAIRERAIFLDLENRLARRPYGIAENEKITMTTRGVSKIVAISTKAMKHKRTRER
FT                   RRLEQPIILKWEPNLSEFSIGRGPSAKTIEEEEAHTKWPLHKTPSMKKRIVHKQRKMDS
FT                   QGIEMLMRSLIKIFKAKNANIEFTEKKTIKVDFVRREQMKFARIQVAHLLGKRGKRDLL
FT                   SGKKENQFIDVLSNYSGNKKTIQPGVVCAGWSGIVVRSGILTQKRSRSPSQAFVIRGEH
FT                   EGKLYDARIKVTRTISHKIVHF"
XX
SQ   Sequence 1086 BP; 367 A; 238 C; 262 G; 219 T; 0 other;
     atggcaacag ttgcattcgc atcagcaatc accaacgcta tcaccaacaa acaaacatcc        60
     accggaatgg tacaatttgg aagttctcca ccagtgccac tacgatccac caccgctatt       120
     ccagtcgcca ccccagtgac gcaacccaaa ttgtacacag tgcaatttgg aagccttgac       180
     ccagtagtcg tcaagggtgt agcagggtcc tctgctaagg aaacccgccg gcagcttaac       240
     gttaaagaag acgttaacct cagggagacc gcggctttgg aggttgtgaa gcctcaaccg       300
     aatattgtgg ctaggatgca tgaagaagca atcagagaaa gagcaatttt cctcgacctt       360
     gaaaataggc tcgcgaggcg cccgtatggc atcgccgaga atgagaaaat taccatgaca       420
     actcgcggcg ttagcaagat agtggctata agcacaaaag caatgaaaca caaacgaact       480
     agagagaggc gcagattgga acagccaatc atcttaaaat gggaacccaa tctcagcgaa       540
     ttctcaattg gaagagggcc ttctgctaaa acaattgaag aagaggaagc ccacacaaag       600
     tggccactgc ataaaacgcc atcgatgaag aaaaggatag tgcacaagca acgcaaaatg       660
     gacagccaag gtattgaaat gctaatgcgc tccttaatta aaatcttcaa agcaaagaac       720
     gccaatattg aattcaccga gaagaagact atcaaagtgg attttgttag gagagagcag       780
     atgaagttcg ctagaataca agtggcgcac ttacttggga agagagggaa gcgcgatttg       840
     ctgtctggta agaaagagaa tcaattcatt gacgttctca gcaactattc aggcaacaag       900
     aaaactatac aaccaggagt agtctgcgct ggctggagtg ggatcgtcgt cagaagtggg       960
     attttaactc aaaaacgaag caggagtcca tcacaagcct ttgtgattag aggcgagcat      1020
     gagggtaagt tgtacgacgc cagaattaaa gtgacgcgaa ctattagtca caaaattgtg      1080
     catttt                                                                 1086
//