ID   AB076440; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076440;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:HOD517J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 37bf1a0b8fb9afcbfeba38acc1d632e7.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="HOD517J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX23"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX23"
FT                   /protein_id="BAC02776.1"
FT                   /translation="MAAVTFASDITNAITNKPTLTGMVQFGNFPPVPLRSTTTTTVATS
FT                   VARPKLYTVQFGSLDPVIVKGGAGSFAKATRQQPNVEIDVSLSEAAALEVANPRSNAVL
FT                   RMHEEANKERAIFLDWETSLRRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RIAQQPIMLKWEPKLSGISIGRSLSANAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKPIKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNGKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 342 A; 227 C; 293 G; 224 T; 0 other;
     atggcagcag ttacattcgc atcagacatc actaacgcca tcaccaacaa accaacactc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgatccac caccactacc       120
     acagtcgcca cttcagtggc gcgacctaaa ttgtacacag tgcaatttgg aagtcttgac       180
     ccagtaatcg tcaagggtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa ccctagatcg       300
     aatgccgtgt tgagaatgca tgaggaggca aacaaggaga gagcaatctt tttggactgg       360
     gaaactagtt tgaggagaag ttcgtatgga attgctgaga acgagaaggt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgtgca       480
     agggagaggc gtatagcgca gcaaccaatt atgctaaagt gggagcccaa attgagcggg       540
     atctcaattg gaagaagtct ctctgcgaat gcgatcgaag ttgaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag ggatcgacat gttaatgcgt tctttgatta agatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagccc attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtagtgcat ttgctcggaa agcgggcaca acgcgacctg       840
     ttgactggcg cagaagagaa ccacttcatt gacaccctaa gcacctactc aggaaatggg       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaagg taatgagcca caaaatcata      1080
     cactat                                                                 1086
//