ID   AB076436; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076436;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:CP833J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; a0307c724a828460ceae8e66e84a0638.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="CP833J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX27"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX27"
FT                   /protein_id="BAC02772.1"
FT                   /translation="MAAITFAPAITNAITNKPASTGMVQFGNFPPVPLRTTIATTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGPRSSAKATRQQLSIAPDANLREAAALEVAKPKPNAVL
FT                   RMHEEANRERALFLDWETSLKRQSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRVQQPIVLKWEPQLSTLSIGGGPAANVIEAEEVRTKWPLHKTPSMKKKTVFKACRMSN
FT                   QGIDMLMRSLIKVFKAKNATIEYTAKKSINIDFVRKERTKFARIQVAHMLGRRAQRDLL
FT                   TGVEENHFIDILSGYSGNKRVISPGVVCAGWSGIIIRDGVLTQSQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIVHY"
XX
SQ   Sequence 1086 BP; 338 A; 255 C; 289 G; 204 T; 0 other;
     atggcagcaa tcacattcgc accagcgatc accaacgcca tcaccaacaa accagcatcc        60
     accggaatgg tacaatttgg gaatttccca ccagtaccat tgcgaaccac catcgcaacc       120
     acagtcgcca ccccagtggc gcaacctaaa ctgtacacag tacagtttgg aagtcttgac       180
     ccagtagtcg tcaaaggtgg accaaggtcc tctgctaagg caacccgcca gcagcttagc       240
     atcgcaccag atgctaacct cagggaagcc gcagctttgg aggttgcaaa acccaagccg       300
     aatgccgtgt tgagaatgca cgaggaggca aacagagagc gagcgctctt cttggactgg       360
     gaaaccagtt tgaaaaggca atcgtatggc attgctgaga acgagaaagt cgtgatgaca       420
     actcgtggtg tcagcaagat agtgcccaga agttcacggg cgatgaagca aaagcgcgcg       480
     agggagaggc gcagggtaca acaaccgatt gtgctaaaat gggagccaca actgagcaca       540
     ctctctattg gaggggggcc tgccgcaaat gtaattgagg cagaggaagt gcgcacaaag       600
     tggccactac acaaaacacc gtcaatgaag aaaaagacgg tgttcaaggc gtgcagaatg       660
     agcaaccaag gaattgacat gctaatgcgt tccttgatca aggtcttcaa ggcgaagaac       720
     gccaccattg aatacactgc gaagaagtct atcaacatag actttgttag gaaggagcga       780
     acaaagttcg ccagaatcca ggtggcacat atgcttggta gaagagcgca acgtgacctg       840
     ttaactggag tggaggaaaa ccactttatt gacattctca gtggttactc gggtaacaag       900
     agagtcataa gcccaggagt ggtttgtgct ggctggagtg gaataatcat tagagacgga       960
     gttctcactc aaagtcagag caggagtccg tcacaagcct ttgtgatcag aggcgaacat      1020
     gaaggcaaat tgtatgatgc cagagtcaaa gttacgaagg tcatgagtca caaaatcgtg      1080
     cactac                                                                 1086
//