ID   AB076435; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076435;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:TD88J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 51ac03c360568fcc0dca4d4bc5d3f542.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="TD88J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX28"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX28"
FT                   /protein_id="BAC02771.1"
FT                   /translation="MAAVTFAPAITNTTANKPASTGMVQFGNFPPVPLRTTVATLVATP
FT                   VAQPKLHTVQFGSLDPVVVKGGAGSSAKATRQQPSVEIDASLREAAALEVAKPKPNAVL
FT                   RMHEEANKERALFLDWETSLKRQSYGIAEHEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIVLKWEPQTNQFSIGGGPAANVIEAEEIRTKWPLHKTPSMKKKMVFKACRMNN
FT                   QGIDMLMRSLIKIFKAKNATIEYTAKRSINIDFVKKERTKFARVQVAHMLGKRAQRDLL
FT                   TGMEENHFIDTVSGYSGNKRAINPGVVCAGWSGVIVRNGVLNQNQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKNMSHKIVHY"
XX
SQ   Sequence 1086 BP; 342 A; 248 C; 289 G; 207 T; 0 other;
     atggcagcag tgacattcgc accagcaatc accaacacca ccgccaacaa accagcatcc        60
     accggaatgg tgcagtttgg gaacttccca ccagtaccat tgcgaaccac cgtcgcaacc       120
     ttggtcgcca ctccagtggc gcaacctaaa ctgcacacag tgcagtttgg aagccttgac       180
     ccagtagttg tcaagggcgg agcagggtct tctgctaagg caacccgcca gcagcctagc       240
     gttgaaatag acgctagcct cagggaagcc gcagctttag aggttgcaaa gcccaaacca       300
     aatgccgtgt tgaggatgca cgaagaagca aataaagagc gagcgctctt cttggattgg       360
     gaaaccagtt tgaaaaggca atcgtatggt atcgccgaac atgagaaagt cgtaatgaca       420
     actcgtggcg ttagcaagat agtgcccagg agttcacgag cgatgaagca gaagcgcgca       480
     agagagaggc gtagagcaca acaaccaatc gtgctgaaat gggagccaca gacgaaccag       540
     ttctctattg gaggaggacc tgccgcaaat gtaattgagg cagaggaaat tcgcacgaag       600
     tggccgctac acaagacacc atcaatgaag aaaaagatgg tgttcaaggc atgcagaatg       660
     aacaatcaag gaatcgacat gctgatgcgt tccttgatta agattttcaa ggcaaagaat       720
     gccactattg agtacaccgc gaagaggtct atcaacatag actttgttaa aaaggagcga       780
     acaaagttcg ccagagttca ggtggcacat atgcttggca aacgagcaca acgtgacctg       840
     ttaactggaa tggaagaaaa ccacttcatt gacactgtca gtggctactc aggcaacaag       900
     agagccataa acccaggagt agtgtgtgcc ggttggagcg gagttattgt taggaacgga       960
     gttctcaacc agaatcagag taggagtcca tcgcaggctt tcgtgatcag aggcgaacat      1020
     gaaggcaaat tgtatgatgc cagggttaag gtcacgaaga atatgagcca caagattgtg      1080
     cattat                                                                 1086
//