ID   AB076433; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076433;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:SGD311J.
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KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
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RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; b58d768507de67e4deae90238c1ec565.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="SGD311J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX30"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX30"
FT                   /protein_id="BAC02769.1"
FT                   /translation="MAAVTFATAITNTTASKPALTGMVQFGNFPPVPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFIKKEQTKFARIQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSNYSGNRKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKRMSHKIIHY"
XX
SQ   Sequence 1086 BP; 354 A; 230 C; 288 G; 214 T; 0 other;
     atggcagcag tcacatttgc aaccgcaatc actaacacca ccgcaagcaa accagcactc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtag tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagacca       300
     aacgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaagctagtt tgaagagaag ctcatatgga attgctgaga acgagaaagt tgtgatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggaaagac gtagagcgca acaaccaatc atactaaagt gggagcctaa attgagcgga       540
     atctcaattg gaggaggact ctccgcgagc gcgattgaag tggaagaagt tcgcacgaag       600
     tggccgcttc acaagacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg gaggaagtcc attaaagtgg atttcataaa gaaagagcaa       780
     acgaagtttg ccagaataca agtagtgcat ttgctcggaa agcgagcaca acgcgacctg       840
     ttgactggtg cagaagagaa ccacttcatt gacaccctaa gcaactactc aggaaataga       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaaga ggatgagcca caaaatcata      1080
     cactat                                                                 1086
//