ID   AB076431; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076431;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:HD75J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; b149d1316aa4ed9e6af8ced9e1570e51.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="HD75J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX32"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX32"
FT                   /protein_id="BAC02767.1"
FT                   /translation="MAAVTFATAITNTTASKPALTGMVQFGNFPPVPLRSTTVTTVATS
FT                   VAPPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARIQVVHLLGKRAQRDLL
FT                   TGAEENQFIDTLSNYSGNREIINPGVVCAGWSGIVIRNGILTQKHSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 346 A; 231 C; 293 G; 216 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcaa accagcactc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gccacccaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtag tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagacca       300
     aacgccgtgt tgaggatgca cgaggaagca aacaaggagc gggcactctt tttagactgg       360
     gaggctagtt tgaagagaag ctcatatgga attgctgaga acgagaaagt tgtgatgaca       420
     actcgtggcg tcagcaagat agtgcccagg agttcaaggg caatgaagca aaagcgcgca       480
     agggaaagac gtagagcgca acaaccaatc atactaaagt gggagcctaa attgagcggg       540
     atctcaattg gaggagggct ctccgcgagc gcgattgaag tggaagaagt ccgcacgaag       600
     tggccgcttc acaagacacc gtcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagtcc attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagtttg ccagaataca agtagtgcat ttgctcggaa agcgagcaca acgcgacctg       840
     ttgactggtg cagaagagaa ccaattcatt gacaccctaa gtaattactc aggaaatagg       900
     gaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attctaactc agaagcatag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaagg tgatgagcca caaaatcata      1080
     cactat                                                                 1086
//