ID   AB076429; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076429;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:DMJ.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 43bd460fcbf3a6d20a2b2e107c6ca9b2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="DMJ"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX34"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX34"
FT                   /protein_id="BAC02765.1"
FT                   /translation="MAAVTFASAITNATINKPTSTGMVQFGNFPPVPLRSTTITTVAIP
FT                   VAQLKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEVAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETSLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSEFSIGGGLSASAIEEEEVRTKWPLNKTPSMKKRTVHRTCKMND
FT                   QGVDMLTRSLVKIFKAKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGRRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRGGILTQRRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTKTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 348 A; 247 C; 287 G; 204 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc accaacgcca ccatcaacaa acctacatcc        60
     accggaatgg tacaatttgg gaatttccca ccagtgccat tacgttccac caccatcacc       120
     acagtcgcca ttccagtggc gcaactcaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagttg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagtc gcagctctgg aggttgcaaa acccaagtcg       300
     agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt cttggactgg       360
     gaaaccagtc taaagagacg ctcgcacgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggcg tcagtaagat agtgcccaga agttcaaggg caatgaaaca aaagcgcgca       480
     agagagaggc gtagagcaca acaaccaatc atcctaaagt gggagcccaa attgagcgag       540
     ttctcaattg gaggagggct ctctgcgagc gcgatcgaag aagaagaagt ccgcacaaag       600
     tggccgctta acaagacacc gtcaatgaag aagaggacgg tgcacagaac atgcaagatg       660
     aatgaccaag gagttgacat gttgacacga tccctggtta agattttcaa ggctaagagt       720
     gccaacattg agtacatcgg aaagaagtcg atcaaggtcg atttcatcag aaaagagcgg       780
     acgaaattcg caagaatcca agtagcgcac ttactcggga ggcgagcaca gcgtgacttg       840
     tcaactggaa tggaagaaaa ccatttcatt gacatcctca gcgggtactc aggtaacaaa       900
     acaaccataa atccaggagt agtttgcgca ggttggagtg gcatagttgt tagaggtgga       960
     attctaaccc agagacgaag caggagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtatgacgc caggatcaaa gtcacgaaaa caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//