ID   AB076428; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076428;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:2J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; b11d6f8a33d415420ecffb12cb4eecf2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="2J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX35"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX35"
FT                   /protein_id="BAC02764.1"
FT                   /translation="MAAVTFASAITNATINKPTSTGMVQFGNFPPVPLRSTTITTVATP
FT                   VAQPKLYTVQFGSLDPVVVKGGAGSLAKATRQQPNVEIDVSLSEAAALEVAKPKSSAVL
FT                   RMHEEANKERALFLDWETGLKRRSHGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSEFSIGGGLSASAIEEEEVRTKWPLHKTPSMKKRTVHRTCKMND
FT                   QGVDMLTRSLVKIFKAKSANIEYISKKSIKVDFIRKERTKFARIQVAHLLGRRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTIHPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKITRTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 346 A; 255 C; 286 G; 199 T; 0 other;
     atggcagcag tcacattcgc atcagcaatc accaacgcca ccatcaacaa acctacatcc        60
     accggaatgg tacaatttgg gaacttccca ccagtgccat tacgttccac caccatcacc       120
     acagtcgcca ctccagtggc gcaacctaag ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagttg tcaagggtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcaaa acccaagtcg       300
     agtgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt cttggactgg       360
     gaaaccggtc taaagagacg ctcgcacgga attgctgaga acgagaaggt cgtgatgaca       420
     actcgtggcg tcagtaagat agtgcccaga agttcgaggg caatgaaaca aaagcgcgca       480
     agagagaggc gtagagcaca acaaccaatc atcctaaagt gggagcctaa attgagcgag       540
     ttctcaattg gaggagggct ctctgcgagc gcgatcgaag aagaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aagaggacgg tgcacagaac atgcaagatg       660
     aacgaccaag gagttgacat gttgacacga tccctggtta agattttcaa ggctaagagt       720
     gccaacattg agtacatcag caagaagtcg atcaaggtcg atttcatcag aaaagagcgg       780
     acgaaattcg caagaatcca agtagcacac ttactcggga ggcgagcaca gcgcgacttg       840
     tcaactggaa tggaagaaaa ccatttcatt gacattctca gcgggtactc aggtaacaaa       900
     acaaccatac atccaggagt agtttgcgca ggttggagtg gcatagtcgt tagaaatgga       960
     attctaaccc agaagcgaag cagaagtcca tcagaggcct ttgtaatcag aggtgagcac      1020
     gagggcaaat tgtacgatgc caggatcaaa atcacgagga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//