ID   AB076426; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076426;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:Ka1J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 3823fdf20108769cdcd3b33d97623005.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="Ka1J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX37"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX37"
FT                   /protein_id="BAC02762.1"
FT                   /translation="MAAVTFASAITNAITNKPALTGMVQFGSFPPVPLRSTTAITATTS
FT                   VAQPKLYTVQFGSLDSVVVKGGAGSFAKVTRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERAIFLDWEASLRRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSEISIGGGLSASAIEVEEVRTKWPLHKTPSMKKRMVHKTCKMND
FT                   QGIDMLTRSLVKIFKAKSANIEYIGKKSIKVDFIRKERTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTIINPGVVCAGWSGIVVRNEILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 344 A; 238 C; 293 G; 211 T; 0 other;
     atggcagcag ttacgttcgc gtcagctatc accaacgcca tcaccaacaa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccagtgccat tgcgatccac caccgctatc       120
     acagccacca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     tcagtagtcg tcaagggtgg agcagggtcc tttgctaagg taacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa gcctagaccg       300
     aatgccgtgt tgaggatgca tgaggaggca aacaaggaga gagcaatctt tttggactgg       360
     gaggctagtt tgaggagaag ctcgtatgga attgctgaga acgagaaagt tgtgatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagcccaa attgagcgag       540
     atctcaattg gaggagggct ctccgcaagc gcgatcgagg tagaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aagaggatgg tgcacaaaac atgtaagatg       660
     aacgaccaag gaatcgacat gttgacacga tccttggtta agattttcaa ggctaagagt       720
     gccaacattg agtacatcgg aaagaaatcg atcaaggttg atttcatcag aaaagagcgg       780
     acgaaattcg caagaatcca agtagcacac ctactcggga agcgagcaca gcgcgacttg       840
     tcaactggaa tggaagaaaa ccattttatc gacattctca gcgggtactc aggtaacaaa       900
     acaatcatca atccaggagt agtttgcgca ggttggagtg gcatagttgt tagaaatgaa       960
     attctaaccc agaaacgaag cagaagccca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtatgacgc caggatcaaa gtcacgagaa cgatgagcca caaaattgtg      1080
     cacttt                                                                 1086
//