ID   AB076424; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076424;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:KD32J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 307e1170a9fa8c37dacc29f911f2b30c.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="KD32J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX39"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX39"
FT                   /protein_id="BAC02760.1"
FT                   /translation="MAAVTFATAITNTTASRSASTGMVQFGNFPPVPLRSTTATTVATP
FT                   VAQPKLYTVQFGSLDPVVFKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMYEEANKERALFLDWEASLRRSSYGIAENEKVVMTTRGISKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKSSGISIGGGLSASAIEAEEVSTKWPLHKTPSMKRKTMHRRCKMND
FT                   QGIDMLVRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNKKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 345 A; 227 C; 296 G; 218 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcag atcagcatcc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgatccac caccgccacc       120
     acagtcgcca ctccagtggc gcagcctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtct tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagaccg       300
     aatgccgtgt tgaggatgta cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggccagtt tgaggagaag ctcgtatgga attgctgaga acgagaaagt tgtaatgaca       420
     actcgtggca tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca acaaccaatt atactaaagt gggagcccaa atcgagcgga       540
     atctcaattg gaggagggct ttctgcgagc gcgatcgaag cagaagaagt tagcacaaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagacga tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttagtgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg gaggaagtcc attaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtagtgcat ttgctcggaa agcgggcaca acgcgacctg       840
     ttgactggtg cagaagaaaa ccacttcatt gacaccctaa gcacatactc aggaaataag       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgttat cagaaacggc       960
     attttgaccc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagggttaag gtcacaaagg tgatgagcca taaaatcata      1080
     cactat                                                                 1086
//