ID   AB076419; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076419;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
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DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:NDJ.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 243a2117520129ce0fc55d5a08646589.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="NDJ"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX44"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX44"
FT                   /protein_id="BAC02755.1"
FT                   /translation="MAAVTFATAITNTTASRSASTGMVQFGNFPPVPLRSTTATTVATP
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKSSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKRKMVHRRCKMND
FT                   QGVDMLMRSLIKIFKAKSANIEFIGRKSVKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGAEENHFIDTLSTYSGNKKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKILHY"
XX
SQ   Sequence 1086 BP; 342 A; 228 C; 296 G; 220 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcag atcagcatcc        60
     accggaatgg tacagtttgg gaacttccca ccagtaccat tgcgatccac caccgccacc       120
     acagtcgcca ctccagtggc gcagcctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagaccg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggccagtt tgaagagaag ctcgtatggt attgctgaga acgagaaagt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagcccaa atcgagcgga       540
     atctcaatcg gaggagggct ttctgcgagc gcaatcgaag tagaagaagt tcgcacaaag       600
     tggccgttac ataaaacacc atcaatgaag aggaagatgg tgcacagaag atgcaagatg       660
     aatgatcaag gagttgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg gaggaagtcc gttaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtagtgcat ttgctcggaa agcgggcaca acgcgacttg       840
     ttgactggtg cagaagaaaa ccacttcatt gacaccctaa gcacctattc aggaaataag       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagcg gcattgttat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagagttaag gtcacaaagg tgatgagcca taaaatctta      1080
     cactat                                                                 1086
//