ID   AB076418; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076418;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:ND10J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 6a5028349dca5a2d6db6b163a387d0b0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="ND10J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX45"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX45"
FT                   /protein_id="BAC02754.1"
FT                   /translation="MAAVTFATAITNTTASKPALTGMVQFGNFPPVPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGPSASAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMNN
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVMHLLGKRAQRDLL
FT                   AGAEENHFIDTLSTYSGSRKIINPGVVCAGWSGIVIRNGILTQKQSRSPSQSFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 344 A; 235 C; 295 G; 212 T; 0 other;
     atggcagcag ttacattcgc aaccgcaatc actaacacca ccgcaagcaa accagcactc        60
     accggaatgg tacagtttgg gaatttccca ccagtgccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaaccgaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagacca       300
     aacgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcatatgga attgctgaga acgagaaagt tgtgatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg cgatgaagca aaagcgcgca       480
     agggaaagac gtagagcgca acaaccaatc atattaaagt gggagcctaa attgagcggg       540
     atctcaattg gaggagggcc ctccgcgagc gcgattgaag tggaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aataatcaag gaattgacat gttaatgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagtcc attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtaatgcat ttgctcggaa agcgggcaca acgcgacctg       840
     ttggctggtg cagaagagaa ccacttcatt gacaccctaa gcacctactc aggaagtagg       900
     aaaatcataa acccaggagt ggtgtgcgct ggttggagtg gcattgtcat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaatcct ttgtgattcg aggagaacat      1020
     gaagggaagc tgtatgacgc cagagttaag gtcacaaaag tgatgagcca caaaatcata      1080
     cactat                                                                 1086
//