ID   AB076417; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076417;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:FD27J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 18c6d9f7c113fe9f9aa3af318277fbe6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="FD27J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX46"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX46"
FT                   /protein_id="BAC02753.1"
FT                   /translation="MAAVTFATAITNTTASKPALTGMVQFGNFPPVPLRSTTVTTVATS
FT                   VAQPKLYTVQFGSLDPVVVKSGAGSLAKATRQQPNVEIDVSLSEAAALQVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPELSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLMRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQIAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGVVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 354 A; 234 C; 287 G; 211 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcaa accagcactc        60
     accggaatgg tacagtttgg gaatttccca ccagtaccat tgcgatccac caccgtcacc       120
     acagtcgcca cttcagtggc gcaacctaaa ctgtacacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc cttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgc aggttgcgaa acctagacca       300
     aacgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtt tgaagagaag ctcatatgga attgctgaga acgagaaagt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggaaagac gtagagcaca acaaccaatc atactaaagt gggagcctga attgagcggg       540
     atctcaattg gaggagggct ctccgcgagc gcgatcgaag tggaagaagt ccgcacaaag       600
     tggccgcttc acaagacacc gtcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttaatgcgt tctttgatta aaatttttaa ggcgaagagt       720
     gcgaacattg agttcattgg aaggaagtcc attaaagtgg atttcgtaaa gaaagagcaa       780
     acgaagtttg ccagagtaca aatagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tggaagaaaa ccatttcatt gacattctca gcgggtactc aggtaacaaa       900
     acaaccataa atccaggagt agtctgcgca ggttggagtg gcgtagtcgt tagaaatgga       960
     attctaaccc agaaacgaag cagaagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacgagga caatgagcca caagattgtg      1080
     cacttt                                                                 1086
//