ID   AB076416; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076416;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:FD21J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; be66b77740c8fc05244e8ddea38cf249.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="FD21J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX47"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX47"
FT                   /protein_id="BAC02752.1"
FT                   /translation="MAAVTFATAITNTTASKSASTGMVQFGNFPPVPLRSTTATTVATP
FT                   VAQPQLYTVQFGSLEPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRPNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTRGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKSSGISIGGGLSASAIEVEEVRTKWPLHKTPSMKRKTVHRRCKMND
FT                   QGIDMLVRSLIKIFKAKSANIEFIGRKSIKVDFVKKEQTKFARVQVVHLLGKRAQRDLL
FT                   TGTEENHFIDTLSNYSGDRKFINPGVVCAGWSGIVIRNGILTQKQSRSPSQAFVIRGEH
FT                   EGKLYDARVKVTKVMSHKIIHY"
XX
SQ   Sequence 1086 BP; 340 A; 227 C; 300 G; 219 T; 0 other;
     atggcagcag ttacatttgc aaccgcaatc actaacacca ccgcaagcaa atcagcatcc        60
     accggaatgg tacagtttgg gaacttccca ccagtgccat tgcgatccac caccgccacc       120
     acagtcgcca ctccagtggc gcaacctcag ctgtacacag tgcagtttgg aagccttgaa       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagaccg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggccagtt tgaagagaag ctcgtatggg attgctgaga acgagaaagt tgtaatgaca       420
     actcgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaagt gggagcccaa atcgagcgga       540
     atctcaatcg gaggagggct ttctgcgagc gcgatcgaag tagaagaagt tcgcacaaag       600
     tggccgttgc ataaaacacc atcaatgaag aggaagacgg tgcacagaag atgcaagatg       660
     aatgatcaag gaattgacat gttagtgcgt tctttgatta aaatctttaa ggcgaagagt       720
     gcgaacattg agttcattgg gaggaagtcc attaaagtgg attttgtaaa gaaagagcaa       780
     acgaagtttg ccagagtgca agtagtgcat ttgctcggaa agcgggcaca acgcgacctg       840
     ttgactggta cagaagaaaa ccactttatt gacaccctaa gcaactactc aggagatagg       900
     aaattcataa acccaggagt ggtgtgtgct ggttggagtg gcattgttat cagaaacggc       960
     attttgactc agaagcagag cagaagtcct tcgcaagcct ttgtgattcg aggagaacat      1020
     gaagggaagt tgtatgacgc cagggttaag gtcacaaagg tgatgagcca taaaatcata      1080
     cactat                                                                 1086
//