ID   AB076410; SV 1; linear; genomic RNA; STD; VRL; 1086 BP.
XX
AC   AB076410;
XX
DT   06-JUL-2002 (Rel. 72, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Turnip mosaic virus P1 gene for polyprotein, partial cds, isolate:C42J.
XX
KW   .
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1086
RA   Ohshima K.;
RT   ;
RL   Submitted (18-DEC-2001) to the INSDC.
RL   Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of
RL   Plant Virology; 1-banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-28-8730)
XX
RN   [2]
RX   PUBMED; 12029167.
RA   Ohshima K., Yamaguchi Y., Hirota R., Hamamoto T., Tomimura K., Tan Z.,
RA   Sano T., Azuhata F., Walsh J.A., Fletcher J., Chen J., Gera A., Gibbs A.;
RT   "Molecular evolution of Turnip mosaic virus: evidence of host adaptation,
RT   genetic recombination and geographical spread";
RL   J. Gen. Virol. 83(Pt 6):1511-1521(2002).
XX
DR   MD5; 1dbd295563d6ad89e51a66432f986e1f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1086
FT                   /organism="Turnip mosaic virus"
FT                   /isolate="C42J"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12230"
FT   CDS             1..>1086
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="polyprotein"
FT                   /note="first protein"
FT                   /db_xref="GOA:Q8JX53"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="UniProtKB/TrEMBL:Q8JX53"
FT                   /protein_id="BAC02746.1"
FT                   /translation="MAAVTFASAITNAITNKPALTGMVQFGSFPPMPLRSTTAITIATS
FT                   VAQPKQHTVQFGSLDPVVVKSGAGSFAKATRQQPNVEIDVSLSEAAALEVAKPRSNAVL
FT                   RMHEEANKERALFLDWEASLKRSSYGIAENEKVVMTTCGVSKIVPRSSRAMKQKRARER
FT                   RRAQQPIILKWEPKLSGISIGGGLSASAIEAEEVRTKWPLHKTPSMKKRTVHRICKMND
FT                   QGVDMLIRSLVKIFKTKSANIEYIGKKSVKVDFIRKGRTKFARIQVAHLLGKRAQRDLS
FT                   TGMEENHFIDILSGYSGNKTTINPGVVCAGWSGIVVRNGILTQKRSRSPSEAFVIRGEH
FT                   EGKLYDARIKVTRTMSHKIVHF"
XX
SQ   Sequence 1086 BP; 349 A; 234 C; 290 G; 213 T; 0 other;
     atggcagcag ttacattcgc atcagctatc accaacgcca ttaccaataa accagcactc        60
     accggaatgg tacagtttgg gagtttccca ccaatgccat tgcgatccac caccgccatc       120
     acaatcgcca cttcagtggc gcaacctaaa cagcatacag tgcagtttgg aagccttgac       180
     ccagtagtcg tcaagagtgg agcagggtcc tttgctaagg caacacgcca gcagcctaac       240
     gttgaaatag acgttagcct cagtgaagcc gcagctctgg aggttgcgaa acctagatcg       300
     aatgccgtgt tgaggatgca cgaggaagca aacaaggaga gagcactctt tttggactgg       360
     gaggctagtc tgaagagaag ctcgtatgga attgctgaga acgagaaagt tgtgatgaca       420
     acttgtggcg tcagcaagat agtgcccaga agttcaaggg caatgaagca aaagcgcgca       480
     agggagaggc gtagagcgca gcaaccaatt atactaaaat gggagcctaa attgagcggg       540
     atctcaatcg gaggagggct ctctgcgagc gcaatcgaag cagaagaggt tcgcacaaag       600
     tggccgcttc acaaaacacc gtcaatgaag aagaggacgg tgcacagaat atgcaagatg       660
     aacgaccaag gagttgacat gttgatacga tccctggtta agattttcaa gactaagagt       720
     gccaacattg agtacatcgg aaagaagtcg gttaaggtcg atttcatcag aaaaggacgg       780
     acgaaattcg caagaattca agtagcacac ttactcggga agagagcaca gcgcgactta       840
     tcaactggaa tggaagaaaa ccatttcatt gacattctca gcgggtactc aggtaacaaa       900
     acaaccataa atccaggagt ggtctgtgca ggttggagtg gcatagtcgt tagaaatgga       960
     attctaaccc agaaacgaag cagaagtcca tcagaggcct ttgtaattag aggtgagcac      1020
     gaaggcaagt tgtacgatgc caggatcaaa gtcacgagga caatgagtca caagattgtg      1080
     cacttt                                                                 1086
//