ID   AB076047; SV 1; linear; genomic RNA; STD; VRL; 2152 BP.
XX
AC   AB076047;
XX
DT   07-JAN-2003 (Rel. 74, Created)
DT   24-APR-2009 (Rel. 100, Last updated, Version 3)
XX
DE   Soybean dwarf virus ORF3, ORF5 genes for coat protein, readthrough protein,
DE   strain:YS, isolate:HD99-3.
XX
KW   .
XX
OS   Soybean dwarf virus
OC   Viruses; Riboviria; Luteoviridae; Luteovirus.
XX
RN   [1]
RP   1-2152
RA   Terauchi H., Kanematsu S., Hidaka S.;
RT   ;
RL   Submitted (12-DEC-2001) to the INSDC.
RL   Contact:Seiji Kanematsu National Agricultural Research Center for Tohoku
RL   region, Laboratory of Plant Disease Management; 4-Akahira,
RL   Shimo-Kuriyagawa, Morioka, Iwate 020-0198, Japan
XX
RN   [2]
RX   PUBMED; 18943620.
RA   Terauchi H., Honda K., Yamagishi N., Kanematsu S., Ishiguro K., Hidaka S.;
RT   "The N-Terminal Region of the Readthrough Domain Is Closely Related to
RT   Aphid Vector Specificity of Soybean dwarf virus";
RL   Phytopathology 93(12):1560-1564(2003).
XX
DR   MD5; c7d2bf3b9152e94a3f504ae8f4c96a03.
DR   RFAM; RF00434; BTE.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2152
FT                   /organism="Soybean dwarf virus"
FT                   /strain="YS"
FT                   /isolate="HD99-3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12049"
FT   CDS             <1..254
FT                   /codon_start=3
FT                   /transl_table=1
FT                   /gene="ORF3"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8B6K7"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B6K7"
FT                   /protein_id="BAC54084.1"
FT                   /translation="STSSGSIAYELDPHCKYSEIQSLLNKFSITKSGSKRFPTRAINGL
FT                   EWHDTSEDQFKIHYKGNGESKIAGSFKISINVLTQNAK"
FT   CDS             <255..1820
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="ORF5"
FT                   /product="readthrough protein"
FT                   /note="This protein is translated by in-frame readthrough
FT                   of the ORF3 stop codon."
FT                   /db_xref="GOA:Q8B6K6"
FT                   /db_xref="InterPro:IPR002929"
FT                   /db_xref="UniProtKB/TrEMBL:Q8B6K6"
FT                   /protein_id="BAC54085.1"
FT                   /translation="VDGEPGPKPGPDPAPQPTPTPEPTPAKHERFIAYTGTLSTLISAR
FT                   QSSDSISLYSIRSQRIRYIEDENSSWTNIDAKWYSQNSVEAIPMFVYPVPEGTWSIEIS
FT                   CEGYQAASSTSDPHRGKCDGMIAYDDDSSKVWNVGQQNNVTITNNKADNDWKYGHPDLT
FT                   INGDRFDQNQVVEKDGIISFHLVTTGPNASFFLVAPAVKKTAKYNFCVSYGDWTDRDME
FT                   FGMVSVVLDEHLEGARSSQYVRKSPRPGHFGVNRSHRLQDSFTPVEYVSEDDSSSSSSI
FT                   VSNRPSTPVSDSDAQFAESLKGKLPTQSKLPPKGFLSRLSAKEKEEISKSRPSNVESQV
FT                   EPLVKAYGYPSQTGVYDAAREILQAKEAAENLAELERDLKEINRLEPRDVIVQEEIPDF
FT                   VPPSEKVVQEDNPEYTPPIWRNADQAVTVSSYEPPDWSRPAYESGDPPKKAGTLKGTLS
FT                   KIGGSLRSGESSLRGSLRKTRDQSDLDNKLSKLSVIQRSQYQRILNNLGKTRAREYIDG
FT                   LDLD"
XX
SQ   Sequence 2152 BP; 653 A; 474 C; 493 G; 532 T; 0 other;
     cttccacctc gtcaggctcc atcgcttatg aacttgaccc acactgcaag tactccgaaa        60
     ttcaatcgct actcaataaa ttcagtatca caaagagcgg ttcgaaacgt ttcccaacca       120
     gagctatcaa tggcctcgaa tggcatgata ccagtgaaga tcaattcaag atccactata       180
     aagggaacgg agagtccaag attgcaggct ccttcaagat ctcgatcaat gtcctaacgc       240
     agaatgctaa ataggtagac ggagaaccgg gtccgaaacc aggtccagac ccagcacccc       300
     aaccaacacc aacacctgaa ccaacgccag ccaaacacga gagatttatc gcgtacaccg       360
     gtacgttgtc tacactcatt agtgctagac agtcttccga cagtatttcc ttatattcca       420
     tccggagtca gaggatcaga tacatcgaag atgaaaattc cagttggaca aacatagatg       480
     caaaatggta ctcacaaaat tctgttgagg ccatcccaat gtttgtatat ccagtgcctg       540
     aaggtacttg gtcaattgag atctcttgtg aaggctacca ggcagcgtct agcacttcag       600
     acccgcatcg tggaaaatgc gatggcatga ttgcttacga cgacgattca tctaaggtgt       660
     ggaatgttgg ccagcaaaac aatgtaacca taaccaataa caaggccgat aatgattgga       720
     agtatggtca tccagatcta acgatcaatg gtgacagatt cgatcaaaat caagtagtcg       780
     agaaagatgg aattatctca ttccatttag taactaccgg ccctaatgca agtttctttc       840
     ttgtcgctcc agctgtgaag aaaacagcta agtataactt ttgtgtttct tacggagatt       900
     ggacagatag agatatggaa tttggtatgg tatcagtagt gcttgatgag cacttagaag       960
     gtgcaaggag ttctcagtac gttaggaaat cgccaagacc aggtcatttt ggcgtcaatc      1020
     gttctcaccg attgcaagat agtttcacac ctgtggaata tgtcagtgaa gatgatagta      1080
     gtagtagtag tagtatagtt agtaatcgac catcaactcc ggttagtgat agtgatgccc      1140
     aattcgcaga atcgcttaag gggaagctcc caacacaatc gaagcttcca cccaaagggt      1200
     tcctatcacg gttaagtgcc aaagaaaaag aagagatttc taagtcaagg ccttcaaatg      1260
     ttgaaagcca ggttgagcct cttgttaaag cttatggata cccgtctcag acaggtgttt      1320
     atgatgccgc tagagagatc ctgcaagcta aagaagctgc agaaaacttg gccgaattag      1380
     aaagggactt aaaggaaatc aacaggctag aaccacggga tgtaatagtt caggaagaaa      1440
     tccctgactt tgtgccgccc tcggagaagg ttgttcagga agataatcct gaatacacac      1500
     ctccgatttg gcgtaatgcc gaccaagctg tgacggtctc atcatatgag cctccagact      1560
     ggagtcggcc agcttatgag tcaggtgacc cacctaagaa ggcaggaacg ctcaaaggaa      1620
     ctctctccaa aatagggggt tctttaagga gtggtgaatc gtctcttaga ggtagcctcc      1680
     gcaagacgcg agatcaatct gatctagata acaagttatc caaactcagt gttatccaga      1740
     gatcccagta ccagaggatt cttaataacc tgggtaaaac gcgtgcgcga gaatatattg      1800
     atggtttaga tttagattag tataatagaa gtaagtgtgc gctttccatc acattaggtc      1860
     ggagccaacc ttggtgagtt gctgtcgtgg gatcctggga aacaggttcg gtgaacaaaa      1920
     agccggtaat ctcgggcgtt cgtcagacgc cgtcgtatca acacagtatg catatccatc      1980
     aataacccga ctccttgtga ctaaaaatta gagttagttt ccgcctctct tgtaaaccac      2040
     atacaagatg cgagcttgtg gggagtacca tcccttgaat aaggatggtt gaaagtttct      2100
     ggttccaatc cattgatcaa aattggcact gcttctggtg attacactgc cg              2152
//