Dbfetch
ID AB076003; SV 1; linear; genomic DNA; STD; VRL; 2064 BP. XX AC AB076003; XX DT 18-APR-2002 (Rel. 71, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 5) XX DE Torque teno felis virus ORF3, ORF2, ORF1 genes, complete cds, isolate: DE Fc-TTV4. XX KW . XX OS Torque teno felis virus OC Viruses; Anelloviridae; Etatorquevirus. XX RN [1] RP 1-2064 RA Okamoto H.; RT ; RL Submitted (12-DEC-2001) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi-Ken 329-0498, Japan XX RN [2] RX PUBMED; 12029143. RA Okamoto H., Takahashi M., Nishizawa T., Tawara A., Fukai K., Muramatsu U., RA Naito Y., Yoshikawa A.; RT "Genomic characterization of TT viruses (TTVs) in pigs, cats and dogs and RT their relatedness with species-specific TTVs in primates and tupaias"; RL J. Gen. Virol. 83(Pt 6):1291-1297(2002). XX DR MD5; cd6f8e8c82d9f6d0f769daf9eea904e1. DR EuropePMC; PMC1143717; 15956568. DR EuropePMC; PMC3818428; 24223918. XX FH Key Location/Qualifiers FH FT source 1..2064 FT /organism="Torque teno felis virus" FT /isolate="Fc-TTV4" FT /mol_type="genomic DNA" FT /country="Japan" FT /isolation_source="cat" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687384" FT regulatory 2..7 FT /regulatory_class="TATA_box" FT CDS join(268..581,1461..1842) FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="UniProtKB/Swiss-Prot:Q8QVL5" FT /protein_id="BAB90852.1" FT /translation="MSASHSLSQSPNLHPDFTYKRQEALWKQLVSAEHRKFCSCGDYTQ FT HFRFPSPVKEDECIRVVGEEGGDGVAVSYHVTKESGDEDPEEVMASIAVGDDGDDDLEL FT CKWNLKPEPLILKQTDPQPLLTSSPGISTVMGSSKTRLMNELLEIIHALSGPDPWESDG FT GMGPQGEPSKSNSRLLYSDPNPEDSSSDDSEMSYFSSSDSTDADITYPNMEGGRTPPRY FT PPPNMGIYF" FT CDS 268..585 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="UniProtKB/Swiss-Prot:Q8QVL4" FT /protein_id="BAB90853.1" FT /translation="MSASHSLSQSPNLHPDFTYKRQEALWKQLVSAEHRKFCSCGDYTQ FT HFRFPSPVKEDECIRVVGEEGGDGVAVSYHVTKESGDEDPEEVMASIAVGDDGDDDLEL FT W" FT CDS 438..1748 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q8QVL3" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q8QVL3" FT /protein_id="BAB90854.1" FT /translation="MYQSRRRRRRRWGRRILSRYKRKWGRRSRRGHGIYRRWRRWRRRP FT RTVVTEQHSRRVKTIIVRGWEPLGNICPTDSARAKATPYASYDSDSGQGQWHGTWGHHW FT FTFQSLVDRAEARLNSFSGNWESYDYLRFLGGTMYFMQPREMCFMFGNDPYLMTSDLDK FT TASQKNRAEETWITPGYLMHRPGTHLILSRQKVERRSMYKIRVPVPTSWRGWFPIPDCF FT SYVLCHWYWTWWDPDACFFDPCATGSSCEAEPWWSTAQTKQAWVDRTKLDDPPVGGTGP FT NQKTWAPFLPSRPCTNYYTHSASFWFKYKLKFQVTGENIWAPVPRDYSQRGTVPTAPSR FT QQVESEARAPYPKTNRPPTTADILPGDLDSDGILEDEAYERITRDNPCPKRPRPLGIRW FT WDGTPGRTLQEQQQAAVLRPKPRRQLLRRLRDVLLQL" FT regulatory 1842..1847 FT /regulatory_class="polyA_signal_sequence" XX SQ Sequence 2064 BP; 519 A; 568 C; 546 G; 431 T; 0 other; tatataagta agtacactga cgaatggctg agtttactgc gtcagccgga ctggtgacag 60 gacgtgcgaa cggaggtgag tagtcatgga actaggagcg cgggcgggtg ccggaggcct 120 ggaggccgga gtcaaggggc ttatcgggcg atgcgaccgg ctgacgggtg ggcctgtctc 180 gttgtaggtc tccatgccag actctgatac cgtctcctta acagattata ggagatctga 240 aagggtgttc gtatgcaagc cagcaatatg tctgcttctc attctctctc tcagtctcca 300 aatctacatc ctgattttac ttataagcga caagaagctc tctggaagca acttgtctcc 360 gcagaacaca gaaaattctg ctcttgtgga gactacaccc aacatttcag atttcctagt 420 cctgtaaagg aggacgaatg tatcagagtc gtaggcgaag aaggcggaga tggggtcgcc 480 gtatcctatc acgttacaaa agaaagtggg gacgaagatc ccgaagaggt catggcatct 540 atcgccgttg gagacgatgg agacgacgac ctcgaactgt ggtaactgaa caacacagta 600 ggagggtcaa aaccatcatt gtcagggggt gggaacccct gggcaatata tgtcccacag 660 acagtgccag ggccaaggct acaccctatg cctcctatga ctctgactct ggacagggcc 720 aatggcacgg gacctgggga caccactggt tcaccttcca gtcattggtg gacagagctg 780 aagcacgcct caactctttc tcgggcaatt gggagagcta tgactacctg cgctttctgg 840 ggggcactat gtacttcatg cagcccagag agatgtgctt catgttcggt aatgacccct 900 acttaatgac ctcagaccta gacaaaacag cctcgcaaaa aaacagagca gaagagacct 960 ggatcacccc aggatatctc atgcacaggc ctgggaccca ccttatcctc agcagacaaa 1020 aggtggagag acgatccatg tacaagatcc gggtccctgt acccaccagc tggcgggggt 1080 ggttccctat accggactgc ttcagctatg tcctctgtca ttggtattgg acttggtggg 1140 accctgacgc ctgtttcttc gatccctgtg ctacaggcag ctcgtgtgaa gcagagccat 1200 ggtggagtac tgcccagacc aaacaggcct gggtagaccg aaccaagctc gatgaccccc 1260 ccgtcggagg aaccggaccc aaccaaaaaa cctgggcccc attcctgcct tccagaccct 1320 gcaccaacta ctatacccac tccgcctctt tttggttcaa atataaattg aaatttcagg 1380 tcaccggaga aaacatttgg gcgccggtgc caagagacta ctcgcaacga ggaactgttc 1440 ccaccgcccc ctcccgccag caagtggaat ctgaagccag agccccttat cctaaaacaa 1500 acagaccccc aaccactgct gacatcctcc ccggggatct cgacagtgat gggatcctcg 1560 aagacgaggc ttatgaacga attactagag ataatccatg ccctaagcgg cccagacccc 1620 tgggaatccg atggtgggat gggaccccag ggagaaccct ccaagagcaa cagcaggctg 1680 ctgtactcag acccaaaccc cgaagacagc tcctcagacg actcagagat gtcctacttc 1740 agctctagcg acagcacaga cgcagacata acttacccta acatggaggg ggggaggacc 1800 ccccctagat accccccccc gaacatgggc atttactttt aaataaaccg tgaattcgaa 1860 aagaggaact tgtggtctgt ggtctgtggt tttccgtagc tcaccacaaa cggacgtcgc 1920 cttggcaacg accgcaactt ctgctttgcg gtcggtttca cttttagggt tagtgttggt 1980 ttacggcagg ggcgtggttt cacgacactg gcgtacacgg cacgcctctc gcgtgacgtg 2040 ttttcctggg agggacacag gggg 2064 //