ID AB064595; SV 1; linear; genomic DNA; STD; VRL; 3729 BP. XX AC AB064595; XX DT 16-DEC-2001 (Rel. 70, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 27 DNA, complete genome, isolate: CT23F. XX KW . XX OS Torque teno virus 27 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3729 RA Okamoto H.; RT ; RL Submitted (03-JUL-2001) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-machi, RL Kawachi-gun, Tochigi 329-0498, Japan XX RN [2] RX DOI; 10.1007/s705-002-8301-7. RX PUBMED; 11855633. RA Peng Y.H., Nishizawa T., Takahashi M., Ishikawa T., Yoshikawa A., RA Okamoto H.; RT "Analysis of the entire genomes of thirteen TT virus variants classifiable RT into the fourth and fifth genetic groups, isolated from viremic infants"; RL Arch. Virol. 147(1):21-41(2002). XX DR MD5; f10d34e75a7c54231ba7daa055c98abe. DR EuropePMC; PMC434092; 15220423. XX FH Key Location/Qualifiers FH FT source 1..3729 FT /organism="Torque teno virus 27" FT /isolate="CT23F" FT /mol_type="genomic DNA" FT /country="China" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687366" FT CDS join(299..681,2507..3017) FT /codon_start=1 FT /transl_table=1 FT /note="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/Swiss-Prot:Q8V7J2" FT /protein_id="BAB79307.1" FT /translation="MPWRPPAHSVPGREGQFYAATFHAHAAFCGCGGFIEHLNSIHPRF FT LGAGGPPPPPPALRRALPAPEGPGGPPQHAPPNPPPEGDHQPPRRGGGAGGAGDGHAGD FT GDAAEEYGPEDLDLLFAAAAEDDMSFKAPSSRHQTRGPGRRAKKRLRFSPGSPRQPRLG FT GESRRSPSPRRTSTPKRKRGATPQAAPAAKTTPASPQTRTPSPVRRRTQTEEGSPHRPP FT PYIAPPPIVEDLLFPNTQKKKKFSKFDWETEAQLAACFDRPMRFFPSDLPTYPWLPKKP FT TTQTTFRVSFQLKAPQ" FT CDS join(299..681,2305..2764) FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/Swiss-Prot:Q8V7J1" FT /protein_id="BAB79308.1" FT /translation="MPWRPPAHSVPGREGQFYAATFHAHAAFCGCGGFIEHLNSIHPRF FT LGAGGPPPPPPALRRALPAPEGPGGPPQHAPPNPPPEGDHQPPRRGGGAGGAGDGHAGD FT GDAAEEYGPEDLDLLFAAAAEDDMLSTTRARSPPTRYPSPVRSLESYKSVTRQGSDRKQ FT FFTSGTKDVDCLQKEVLKECRNTHQMMKIFRQVLQSAQLSTPDPRAWPESKEAPTLFSG FT LSKTAKTRRRVKKKPLSSKNKHTKKKKRSYSSSSPSSKDNTSESSNEDSESCSETYSN" FT CDS 299..685 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q782G3" FT /protein_id="BAB79309.1" FT /translation="MPWRPPAHSVPGREGQFYAATFHAHAAFCGCGGFIEHLNSIHPRF FT LGAGGPPPPPPALRRALPAPEGPGGPPQHAPPNPPPEGDHQPPRRGGGAGGAGDGHAGD FT GDAAEEYGPEDLDLLFAAAAEDDM" FT CDS 562..2799 FT /codon_start=1 FT /transl_table=1 FT /transl_except=(pos:562..564,aa:Met) FT /note="ACG for ATG as start codon" FT /note="ORF1" FT /db_xref="GOA:Q8V7J0" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q8V7J0" FT /protein_id="BAB79310.1" FT /translation="MAWWWGRWRRRWPRRRWRRRRRVWPRRSRFAVRRRRRGRYVSKRR FT RFRRRRRRRGRPRYRGRRKKRQTLVIRQWQPDVVRFCKINGWLPLIVCGSGSTQNNFIV FT HSEDITPRGAPYGGNLTHITWCLEAIYQEFLMHRNRWTRSNHDLDLMRYVGVRFKAYRH FT PTTDYIISYSKTSPFQVTELSYLSCHPLLMLLSKHHIVVKSLQTKPRGKPYVKFFCKPP FT KLMLNKWYFTKDFAKVPILMMWATACEPRNPWLGEGTLSPCIGFYALKPSIYTSLSNLP FT AKVQMFATGTQSDSLTTSSTGFYKTVHPSSITTTSKEWEYTYTGLMEKFFKQATNKPYN FT WENYGTPADYGSTYTTFSTHRSTRYETIKKEYQKVYPTLTTQTPTNFFLTQEFGFYSPY FT YLTPSKRDIDWHTPYTYTRYNPLADKGLGNMIWADWCSRDEAAYSPTQSKCMLKDLPLF FT ILFYGYIDWVQKSIGSQTITRDMRLMVICPYTEPQLVDPQDKTKGFVLYGDTFANGNMP FT VLAPQIPISWFVRWYPNFAHQREVLERVVSCGPFMVRDQEKNSWDITLGYHFLFKWGGS FT PLPSQAIDDPSQKPTHALPEPGTLPRILQVSDPARLGPKTIFHQWDQRRGLFTKRSIKR FT MSEYSSDDENFSPGPSKRPALDTRPEGLAGEQRSAYAFLRALQDSQDSEESQEEAPLLE FT EQAHQKEKEELLLKQPQQQRQHQRVLKRGLRVLFGDVLKLRRGLHIDPLLT" XX SQ Sequence 3729 BP; 1014 A; 1101 C; 890 G; 724 T; 0 other; attttgttca gcccgccaat ttctgttcaa acaggccaat cagcgtctac tacgtacact 60 tcctggggtg tgtcctgcca ctgtatataa accagagggg tgacgaatgg tagagttttt 120 cctggcccgt ccgcggcgag agcgcgagcg aagcgagcga tcgggcgtcc cgagggcggg 180 tgccggaggt gagtttacac accgcagtca aggggcaatt cgggcacggg tctggccggg 240 ctatgggcaa ggctcttaaa aaattccccg ttactgtgct ccgccaggat accaagtcat 300 gccgtggaga ccgccggcgc actcggtgcc tggtagagaa ggccagttct acgcggcgac 360 gtttcacgcg cacgctgctt tctgcggttg tgggggtttt attgagcatc ttaatagcat 420 tcatcctcgc tttctcgggg ctggggggcc accgccacct ccgcctgccc taaggagagc 480 cctgccagcc cccgaaggcc ccggaggccc tccgcagcac gccccgccca accctcctcc 540 ggagggtgac caccagccgc cacggcgtgg tggtggggcc ggtggcgccg gagatggcca 600 cgcaggagat ggagacgccg cagaagagta tggcccagaa gatctagatt tgctgttcgc 660 cgccgccgcc gaggacgata tgtgagtaag aggcgccgct tcaggcgcag acgcagacga 720 agggggcgac ccagatacag ggggcgacgc aaaaagagac agactcttgt tatcagacag 780 tggcaaccgg acgtggtccg gttctgcaag ataaatggat ggctacctct aattgtctgt 840 ggctcaggga gcacccagaa caattttata gtccactcag aggacataac tccaagagga 900 gccccctatg gaggcaacct cacacacata acatggtgcc tagaggccat ctaccaagag 960 tttttaatgc acagaaacag atggaccaga agcaaccatg acctagacct catgagatac 1020 gtaggagtga gattcaaggc ctacagacac cccacaacag actatataat ctcctacagc 1080 aaaacctcac cctttcaggt cacagaactc agctacctca gttgccaccc gctcttaatg 1140 cttctcagca aacaccacat agtggtaaaa agcctacaga ctaagcccag aggcaaaccc 1200 tatgttaaat tcttctgcaa gcctccaaaa ctcatgctaa ataagtggta ctttacaaaa 1260 gactttgcaa aagtaccaat actcatgatg tgggccacag cctgtgaacc cagaaaccca 1320 tggctcggag aaggcaccct ctcgccctgc ataggcttct atgcactaaa accatccata 1380 tatacctcac ttagcaactt accagcaaaa gtacaaatgt ttgctacagg tacacaatca 1440 gactctctaa caacatcctc aacaggattt tataaaacag tacaccctag tagtataact 1500 acaacatcaa aagaatggga atacacatac acaggcctaa tggaaaaatt ctttaaacaa 1560 gccacaaaca aaccttataa ctgggaaaac tacggcacac cagcggacta tggcagcaca 1620 tacacaacat tttcaacaca cagaagtaca agatatgaaa caattaaaaa agaataccaa 1680 aaagtatacc ccacactaac aacacaaaca ccaacaaact tctttttaac acaagaattt 1740 ggcttttaca gcccatacta cttaacacca tccaaaagag acatagactg gcacacacca 1800 tacacataca caagatacaa cccactagca gacaaaggcc taggcaacat gatatgggca 1860 gactggtgta gcagagatga ggccgcctac agcccaacac aaagcaaatg catgcttaaa 1920 gacctgccac tattcatact attctatggc tacatagact gggtacaaaa gagtataggg 1980 tctcaaacaa taaccagaga catgagactc atggttatat gtccatacac agagccacaa 2040 ctagtagacc cccaagataa aactaagggc tttgtactat atggagacac atttgccaac 2100 ggaaatatgc cagtacttgc accacagata cccatctcgt ggtttgtccg ttggtacccc 2160 aactttgcac accaaaggga agttttagaa agagtggttt cctgtggacc gttcatggtc 2220 agagaccagg aaaagaacag ttgggacatt acactaggct accacttcct attcaaatgg 2280 ggcggatccc ctctcccctc tcaggctatc gacgacccga gccagaagcc cacccacgcg 2340 ctacccgagc ccggtacgct ccctagaatc ttacaagtca gtgacccggc aaggctcgga 2400 ccgaaaacaa tttttcacca gtgggaccaa agacgtggac tgtttacaaa aagaagtatt 2460 aaaagaatgt cggaatactc atcagatgat gaaaattttt cgccaggtcc ttcaaagcgc 2520 ccagctctcg acaccagacc cgagggcctg gccggagagc aaagaagcgc ctacgctttt 2580 ctccgggctc tccaagacag ccaagactcg gaggagagtc aagaagaagc ccctctcctc 2640 gaagaacaag cacaccaaaa agaaaaagag gagctactcc tcaagcagcc ccagcagcaa 2700 agacaacacc agcgagtcct caaacgagga ctccgagtcc tgttcggaga cgtactcaaa 2760 ctgaggaggg gtctccacat agaccccctc cttacatagc ccctccacct atagtggagg 2820 acctgctttt tcctaacacc caaaaaaaaa aaaagttctc caagttcgac tgggagacag 2880 aggcgcagct agctgcctgc ttcgacaggc ctatgcgttt cttcccctca gacctcccaa 2940 catacccgtg gctaccaaaa aagcccacta cccaaactac ctttagagtc tcctttcaac 3000 taaaagcccc ccaataaaat ttcaaggccg tgggactttc acttgtcggt gtctgcttct 3060 taaggttacc aagcactccg agcgtaagcg aggagtgcga cccccccccc tgtggcaact 3120 tcctcggggt ccggcgctac gcgcttcgcg ctgcgccgga cgcctcggac cccccctcga 3180 cccgaatcgc ttgcgcgatt cggacctgcg gcctcggggg ggtcgggggc tttactaaac 3240 agactccgag ttgccattgg acactgaggg ggcgtacagc acgaaagtga gtggggccag 3300 acttcgccat agggccttta acttccgggt gcgtctgggg gccgccattt tagcttcggc 3360 cgccatttta ggccctcgcg ggcctacgta ggcgcgtttt tatgacgtca cggcagccat 3420 attggttgtg acgttactct cacgtgatgg gggcgtgctc taacccggaa gcatcctcga 3480 ccacgtgact gtgacgtcac ggccgccatt ttgtgctatc cgccattttg tgacttcctt 3540 ccgctttttt aaaaaaaaga ggaagtatga cgtagcggcg ggggggcggc gcgcttcgcg 3600 cgccgcccac tagggggcgc tgcgcgcccc cccccgcgca tgcgcgggtc ccccccccgg 3660 gggggctccg cccccccggc cccccccgtg cttaatccac cgcgcatgcg cagccacgcc 3720 cccgccgcc 3729 //