ID   AB063333; SV 1; linear; genomic RNA; STD; VRL; 2218 BP.
XX
AC   AB063333;
XX
DT   22-JUN-2001 (Rel. 68, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Cucumber mosaic virus genes for 3a protein and coat protein, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2218
RA   Takanami Y., Furuya N., Takeshita M., Okuno K., Kameya-Iwaki M.;
RT   ;
RL   Submitted (19-JUN-2001) to the INSDC.
RL   Yoichi Takanami, Kyushu university, Grduated school of Bioresource and
RL   Bioenvironmental Sciences; Hakozaki 6-10-1, Higashi, Fukuoka 812-8581,
RL   Japan (E-mail:takanami@agr.kyushu-u.ac.jp, Tel:81-92-642-2834,
RL   Fax:81-92-642-2834)
XX
RN   [2]
RA   Okuno K., Kameya-Iwaki M., Takeshita M., Furuya N., Takanami Y.;
RT   "A Cucumber mosaic virus isolated from Silene armeria";
RL   Unpublished.
XX
DR   MD5; 99722aaaada89c5d3d2fde9c0294c23c.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2218
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="Si"
FT                   /isolate="Silene armeria"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Yamaguchi-city"
FT                   /clone="pCSi3"
FT                   /db_xref="taxon:12305"
FT   CDS             121..960
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q91PP7"
FT                   /protein_id="BAB61037.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFHPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSGLARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1261..1917
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q91PP6"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q91PP6"
FT                   /protein_id="BAB61038.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASTSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVMEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2218 BP; 521 A; 523 C; 528 G; 646 T; 0 other;
     gtaatctaac cacctgtgtg tgtgtgtgtg tgtatcgagt cgtgttgtcc gcacatttga        60
     gtcgtgttgt ccgcacatat atatttattt cgttgtacag tgtgttagat ttcccgaggc       120
     atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc tacgtctgac       180
     gatcttcaaa agatattatt tagccctgaa gccattaaga aaatggctac tgagtgtgac       240
     ctaggccggc atcactggat gcgcgctgat aatgctattt cagtccggcc cctcgttccc       300
     gaagtaaccc acggtcgtat tgcttccttc tttaaatctg gatatgatgt tggtgaattg       360
     tgctcaaaag gatatatgag cgtccctcaa gtgttatgtg ctgttactcg gacagtttct       420
     actgatgctg aagggtcctt gagaatttac ttagctgatc taggtgacaa ggagttatct       480
     cctatagatg ggcaatgcgt ctcgttacac aaccatgatc ttcccgcttt ggtgtctttc       540
     caccccacgt acgactgtcc tatggaaaca gttgggaatc gtaagcggtg ttttgctgtc       600
     gttatcgaaa gacatggtta cattgggtat accggtacca cggctagcgt gtgtagtaat       660
     tggcaagcaa ggttttcttc taagaataac aactacactc atatcgcagc tgggaagact       720
     ctagtgctgc ctttcaacag attagctgag caaacaaaac cgtcaggtct cgctcgcctg       780
     ttgaagtcgc aattgaacaa cattgaatct tcgcaatatc tgttaacgaa cgcgaagatt       840
     aatcaaaatg cgcgcagtga gtccgaggaa ttaaatgttg agagccctcc cgccgcaatc       900
     gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa cggtctttag       960
     cactttggtg cgtattagta tataagtatt tgtgagtctg tacataatac tatatctata      1020
     gtgtcctgtg tgagttgaaa cagtagacat ctgtgacgcg atgccgtgtt gagaagggaa      1080
     cacatctggt tttagtaagc ctacatcaca gttttgaggt tcaatacctc ttactccctg      1140
     ttgagccccc ttgctttctc atggatgctt ctccgcgaga ttgcgttatt gtctactgac      1200
     tatatagaga gtgtgtgtgt gctgtgtttt ctcttttgtg tcgtagaatt gagtcgagtc      1260
     atggacaaat ctgaatcaac cagtgctggt cgtaaccgtc gacgtcgtcc gcgtcgtggt      1320
     tcccgctccg cctccacctc ctcggatgct aactttagag tcttgtcgca gcagctttcg      1380
     cgacttaaca agacgttagc agctggtcgt ccaaccatta accacccaac ctttgtaggg      1440
     agtgaacgct gtaaacctgg atacacgttc acatctatca ccctaaagcc accaaaaata      1500
     gaccgcgggt cttattacgg taaaaggttg ttattacctg attcagtcat ggaatatgat      1560
     aagaaacttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc      1620
     gtgtgggtga cagtccgtaa agttcctgcc tcctcggact tatccgttgc cgccatctct      1680
     gccatgtttg cggacggagc ctcaccggta ctggtttatc agtatgctgc atctggagtc      1740
     caagctaaca acaaattgtt gtatgatctt tcggcgatgc gcgctgatat aggcgacatg      1800
     agaaagtacg ccgtcctcgt gtattcaaaa gacgatgcgc tcgagacgga cgagctagta      1860
     cttcatgttg acgtcgagca ccaacgcatt cccacgtctg gggtgctccc agtttgattc      1920
     cgttttttca agaaccctcc ctccgatttc tgtggcggga gctgagttgg cagttttgct      1980
     ataaactgtc tgaagtcact aaacgttttt acggtgaacg ggttgtccat ccagcttacg      2040
     gctaaaatgg tcagtcgtgg agaaatccac gccagcagat ttacaaatct ctgaggcgcc      2100
     tttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtacct ctagcacaac      2160
     gtgctagttt cagggtacag gtggcgtcca ctttcgtggg ggcctccaaa ggagacca        2218
//