ID AB061774; SV 1; linear; genomic RNA; STD; VRL; 8918 BP. XX AC AB061774; XX DT 06-JAN-2004 (Rel. 78, Created) DT 30-JAN-2009 (Rel. 99, Last updated, Version 2) XX DE Melon yellow spot virus RdRp gene for RNA dependent RNA polymerase, DE complete cds. XX KW . XX OS Melon yellow spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; unclassified Tospoviridae. XX RN [1] RP 1-8918 RA Okuda M., Kato K., Hanada K.; RT ; RL Submitted (16-MAY-2001) to the INSDC. RL Contact:Mitsuru Okuda National Agricultural Research Center for Kyushu RL Okinawa Region, Department of plant protection; 2421 Suya, RL Nishigoushi-machi, Kikuchi, Kumamoto 861-1192, Japan XX RN [2] RA Okuda M., Kato K., Hanada K.; RT "Nucleotide sequence of the M RNA segment of Melon yellow spot virus"; RL Unpublished. XX RN [3] RA Okuda M., Kato K., Hanada K.; RT "Nucleotide sequence of the L RNA of melon yellow spot virus"; RL Unpublished. XX DR MD5; c48fab083363f7c2e73ebddb867c74bb. XX FH Key Location/Qualifiers FH FT source 1..8918 FT /organism="Melon yellow spot virus" FT /segment="L" FT /mol_type="genomic RNA" FT /isolation_source="melon" FT /db_xref="taxon:89471" FT 5'UTR 1..32 FT CDS complement(274..8886) FT /codon_start=1 FT /transl_table=1 FT /gene="RdRp" FT /product="RNA dependent RNA polymerase" FT /db_xref="GOA:Q76M60" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR007322" FT /db_xref="InterPro:IPR015841" FT /db_xref="UniProtKB/TrEMBL:Q76M60" FT /protein_id="BAD06422.1" FT /translation="MNIQTINSFLDISGEVTVYLQNIKDELLRMSNTIQRKFPDGNETI FT EAGLNSIMSMSHILDKIEEMKSSYHQSTSSIDQKEMSDQISLFLDKYKELELMRHDLFG FT VLASTRLHFAPKYRHDVYLKECIIDYLEYCHKKASIRNTITDLDSLLETLVFQHLTPDN FT YTIYKETNGEKACLMIYDWKVSIDAMTESKTSENYYTSVWRTFKDIKIDDEPFLERHPI FT FITIVILNPTGPMNITVTTCRVIQDFKQSPYKTFPGRKKAANLSKLISVNTLRQITGHA FT SECFSRFYAETQTFKNLLLSRVGDYMNRSNEVFFSHWSHEYKKTNLSNNQMSKDVIDII FT NSLKNPKICKELIINFIFGNYVLFRNTMSDLHAKDRFEGYKSHCEMFGVVPAENEEELK FT DYLEANDDLLSELYDDHLTKIKKDVVSKKEKEVQIESIEDAFNMNAEDYAREYPGCFTN FT NLQETKTNFSVCWSPSTDDLIMEEMNYNNAIIDSFRKSFLEEFRLIFNKPYNGIAADHH FT FGNSLFDLVRTCLVDLSTDTTGQDKITLEDVVDVKDGSIQVQRPEKSKIWKNVNGVTTR FT NGNEFSISQSTSSTAKKLFFKGLTLMNIGMGKKKKADCKDELKSKLQQLKLTKEAEGGE FT YDISKSETILNTSLKAVTHQKKLIRHDNPDVDYYCKSMIESMYVLHGLDSRKKNEGKIS FT SVYNEYCKNPEEIFTKGNLIETETIIAKNIHAVASELSVYSYSEDMMQIAKGVMVADRF FT MKKTDFKILTCANTSMICLAFKGDGINTGKSGVPYITLHKVEKEIQPYFASLYTKELVV FT SFLVDGYYINIMRPQRLNQVRLLSLFKAPSKVPILFSQYSLLSSEIKSWLNKPSVNVFE FT CPENKIHNMQKILFSSVIIGTVTKLSRMGIFDFMRYAGFLPLSDYSNIKEYIAEKFDPD FT ITNVVDCFFVAGIKSLLLKMEEINLSNSIKPLTIDQENDMSGGINDLNITCPITGSTLK FT TIECLYNNVYLAIYMMPKSLHTHVHNLTTLLSVPAEWEIKFRERMGFKINEEIVPKEDM FT FNDSGPFSINGVLNIKTLFDYYRKNIDNVASCRSNIEDKEDFLSVPYKIKTLTSSKKCS FT KSDIIKNSEIATALKDVYGKDPSTIKGNNLYILKGVLKCFSEDRESVQTFLEVENMNVK FT NYIHFFANILSGDDKVTMKTSSEKFYYKSHPLTVESYMKVRYGHLKTTTVLKSKKVSEE FT LYDLIKEFNKIMEVDLESLEKLGRGLDGNRTTFMQLLEFIMLKTRANAGNTNFLVSVFE FT KMQRTKMDREIYLMSMKTKMMLYFIEHTYKHIAQSDPSEAISISGDYKIKNLASLSYDT FT ITNYNTSLQKNLECKMAFLSADQSKWSASDLTYKYILAVLMNPILTTGEINLMCECILM FT YIKLKRVCIPTDIFLNLKRGQKEYGSYGTALSVLTDNLETNTFPVSMNWLQGNLNYLSS FT VYHSCAMLGYEKAMKRNKDYDFTIRWMVHSDDNATSIVARGDIKNLLQSFKCGSMSELL FT FRTIQSHFKSYCITLNPKKSYASESEVEFISERIINGAVIPLYCRHLANCSTESSHNSY FT FDDLMSLSTHVTMLLRKGCPNELISFAYSAIQVQSLSIYSMLPGEVNDINSIIKDIEFP FT LSKKEIPTCAGGWMHAPVELMSILGPSSNDQLIYYKIILEFFDLKDFSTLKKNIDSLGY FT VTYRINDLFKRINNNNLTSADRKMICMVNLFKTSLMSEDCDSLSIGMKFQSMITQIIKL FT PSFVSESSLMKNSSFQDFCRIFPNLRKNSEILDGLNYTTAGEMDIDERNESKFLSSLQL FT DELSKHMATHPEAYLISPMNDKDYILTNLYAYSSVSKRNQMSNQSTEKLALDRILRSKA FT KTFLDPDLKEMVTYRENMLLKMKQIMSTEGNDFKIINTISKLMVRDMNFEMIISLMENV FT VANASIPKANYNFRWFITEKVPSVIEGSPGLIVMSAVYGMDYLVNLGLKKLPLTETSIS FT ILHDIFGAKKTFDDVKNCLSGGPDEMKTDEFRISSKLKQTVMSINYMIQSQNKLLSINT FT CFSRKNFPFYSKYNLGKTFITNVLAIWSTIYSRLTNINFYTNLNFVIDRSSRLIVSLQR FT DMNLEKLIDCCAYVSDRIQSLFPDITVEAIQEILNRLNFNGVDLIRKMKSEINEVKRAI FT NNIKTSSHVTLSFRPQMIAMSRHAAWLYNFGYINEKEFKFVIDQIRQSEVHYIKTDEQD FT ARGYYVSGHSYKIGIKTRYNYVQLAMTNQDIQIQLHSPYEYKREEDGKIWEVHVKSIYK FT LLQKLLSDKQSVLKTFLSMRGDLLPNEFCIHESSNRTLLILMNDTSKPMKIERMKSKAV FT STTFTHLIFSWDLMDNQSKYQLRKALTGECYSGLYKTIDDSDEFVKVILNNLKQSLECG FT EEMDSIVEKVLDGIDDEESIDLIKNSVEQIHDVAIRGLTECKTSEEFENYLRDEEFQDL FT VDFQVSLLQQIIDEKHGIDSRIERAVQQLTSWTNSLSRFKDICTMLKFSMVNDSKGIRT FT YKATGSDFNSLSASEIMTSDGYDLFEMLKLIKACEACHSSNSILNLMAFKNIKNKKFIP FT SHRRFRSHTVHFDFYLILNNEVMSNFYEYKTVSLQDVKISNHVKEVMSNHGFTITGHVM FT KLDESGLELNPVEIVDDSSTYDKVAKQMRVTKKKSAHLIPANTLLLGELMKFLMLCVNG FT EEHDIMKLLRSHFEMRPFRENRLLSIQDAIMTCRISGCVQQHFLNDKKEILLLGVADSL FT ENFINLAIPDHPFVEPFKADLLVRKALNEKDANRKYEILENIRNCMTSDVDFLTEKCLY FT SNSTNEEINALIFNAVSKIDSEMSSLRPKNRNDKQRLYNLFKEYAEAGSSQS" FT 3'UTR 8646..8918 XX SQ Sequence 8918 BP; 2595 A; 1694 C; 1406 G; 3223 T; 0 other; ggagcaatca agcaacaaat caaaatacca ctagaaatca taaacataat caagaaatac 60 tatctaaggc tctggtactg tgtttaatag gttgtaacat tctttgctgc gttccactta 120 aacatcatta actatttggc tattgttaaa catcagtgtt tttaaaatgc tttcctgcat 180 gatgcattgg caacaaggct gtggtatttt gattcatcta tactattttc tattgtgcca 240 gtctatatgg tgtttaagct ccatatctcc gtatcaactt tgactagatc ctgcttctgc 300 atactctttg aataaattgt acaatctctg tttatcattt ctgtttttgg gtcgcaaaga 360 tgacatttct gaatctatct tgctaacagc attaaaaatc aatgcattga tttcttcatt 420 agttgagtta gaatataggc atttctctgt taagaaatcc acatctgatg tcatgcagtt 480 tctgatattt tctaagattt catattttct attagcatcc ttctcattta gagctttacg 540 cactaagagg tctgctttaa acggctccac aaaagggtga tctggaatag ccagattaat 600 gaaattttca aggctgtctg caactcctaa gagaagtatc tcttttttat catttaaaaa 660 atgctgttgg acacaaccgc taatcctgca agtcattatt gcatcttgta tgctcagtaa 720 cctattttcc ctgaagggcc tcatttcaaa atgacttctg agcaatttca tgatatcatg 780 ttcttcaccg ttgacacaaa gcattaaaaa tttcatgagt tctcccagaa gtaaagtatt 840 tgcaggtatc aaatgagcac tttttttctt tgtcactctc atctgtttgg caactttatc 900 atatgtggaa gaatcatcaa ctatttccac tgggtttaat tccaacccac tttcatctaa 960 cttcataaca tgtcctgtga tagtaaatcc atggttgctc ataacttctt tgacgtggtt 1020 agatatcttc acatcttgca atgaaacagt tttatattca taaaaattac tcataacttc 1080 attattcagt attaaataga aatcaaaatg gactgtgtgg gatctgaatc tcctgtggct 1140 gggtatgaac tttttgtttt tgatgttttt aaatgccatt aaattcaaaa tagaattgct 1200 cgaatggcaa gcttcacacg cttttatcag cttcaacatt tcgaacaggt catagccatc 1260 tgacgtcata atttcactag cagataaaga attaaaatca gacccagtag ctttatacgt 1320 tctaattcct ttagagtcgt taaccataga gaatttcaac attgtacaaa tatccttgaa 1380 tcttgacaaa ctgttggtcc aacttgtaag ttgctgcact gctctctcaa ttctagaatc 1440 tataccatgt ttttcgtcga tgatttgctg gaggagactt acctgaaagt caacaagatc 1500 ttggaactct tcatctctta aatagttctc gaactcttca gatgttttgc attcggtcaa 1560 gcctctgatt gctacatcat ggatttgctc aacagaattc tttatcaaat caatgctttc 1620 ctcgtcatca atcccatcca acaccttttc tactatactg tccatttctt ctccacactc 1680 caagctttgt tttaaattgt ttaaaatcac tttcacaaat tcatcactat catctatagt 1740 cttgtaaagc ccactataac attctcctgt caaagctttt cttagttggt attttgactg 1800 attatccatt agatcccaag aaaaaatcag atgtgtaaag gtagttgaca ctgcctttga 1860 cttcattctc tctattttca ttggttttga tgtgtcattc attaatatta atagtgtcct 1920 gttagagctt tcgtggatac agaattcatt gggcaataga tcgcctctca tgctaagaaa 1980 ggttttcaaa acactttgtt tatcagacaa cagtttctgc agcagcttgt aaatggactt 2040 aacatgaact tcccagattt ttccatcctc ttctctctta tactcataag gtgaatgcaa 2100 ttgaatttgt atgtcttggt tggtcatggc caattgaaca taattgtatc tggtttttat 2160 acctattttg tatgaatggc ctgaaacata gtatccccgg gcatcttgct catcagtctt 2220 gatgtagtgc acttcactct gtcttatttg atctatgaca aacttgaatt ctttttcgtt 2280 gatgtaaccg aagttataaa gccatgctgc atgacgactc atagcaatca tttgaggtct 2340 aaaagatagt gtgacatggc tagatgtttt tatattatta atagctcttt tcacctcatt 2400 gatttctgat ttcattttcc tgattaagtc taccccattg aagtttaatc tattaagtat 2460 ctcttgtata gcttccactg taatatctgg aaataaactc tgtattctgt ctgaaacata 2520 agcacaacaa tctataagct tctctaaatt catgtctctt tgcagggata caatcaatct 2580 ggaactccta tctataacaa aattcaagtt agtgtagaaa ttaatattgg tcaacctact 2640 gtatatagta ctccatatag ctaaaacatt agttataaat gttttcccta agttatactt 2700 tgaataaaat gggaagttct tcctagagaa gcaagtgttg atggataaga gtttgttctg 2760 tgactggatc atgtagttaa tgctcatgac agtctgtttc aacttggatg agattctgaa 2820 ctcatcagtt ttcatttcat caggtcctcc actaaggcag tttttcacat catcaaatgt 2880 ttttttagct ccaaatatgt catgtaggat tgatatagat gtttcagtta gcggcagttt 2940 ctttaagccc agattgacca aataatccat cccgtaaact gcagacatta caatcagccc 3000 aggtgaacct tctatgacac tggggacttt ctctgttata aaccatctaa aattatagtt 3060 ggctttgggt atagaagcat tagctaccac attttccatt aaagaaatga tcatttcaaa 3120 gttcatatct ctgaccatca gcttagagat ggtgttaatt atcttgaaat catttccttc 3180 cgtgctcatg atttgcttca ttttcaacaa catgttttct ctatatgtaa ccatctcttt 3240 caaatcagga tcgagaaaag tcttggcttt agatcttaaa atcctgtcta aagctaattt 3300 ttctgttgat tggtttgaca tttgattcct tttactaaca ctactgtacg catataaatt 3360 tgttaaaatg tagtctttat cgttcatggg ggagatcaaa tatgcttcag ggtgagttgc 3420 catgtgctta cttaactcat ccaattgcag tgatgataag aactttgact cattccgctc 3480 atctatatcc atttcaccag cagttgtgta gttaagtcca tccaatatct cagaattttt 3540 tctaaggttt gggaaaatcc tacaaaaatc ctggaagcta gaattcttca tcaatgagct 3600 ttcactcacg aaacttggca atttaattat ctgagtgatc atggattgga atttcatccc 3660 tatgctcaag ctgtcgcaat cttcagacat caaactagtc ttaaacaagt tcaccatgca 3720 tatcattttc ctatcagctg aggtcagatt attgttattg attcttttga ataaatcatt 3780 tattctatat gtaacataac ctaatgaatc aatgttcttt tttaaggtac taaaatcttt 3840 caaatcaaaa aactctagaa tgattttgta gtaaattaat tgatcatttg acgacggacc 3900 cagtatagac atcaattcaa caggtgcatg catccatcca ccagcacaag tgggtatttc 3960 cttcttactt aaaggaaatt ctatatcttt gattatagaa tttatgtcat tcacttctcc 4020 aggtaacata gagtaaatgc tgagcgattg aacctggatt gctgaatatg caaatgagat 4080 caattcattt ggacaacctt ttctaagaag catagtcaca tgtgtggaca atgacattaa 4140 gtcatcaaaa taactattat gcgagctctc tgtgctgcag tttgccaaat gacggcaata 4200 cagtgggatg acagcaccat taataattct ttctgaaata aactccacct cagactctga 4260 agcataactc tttttaggat ttaatgtgat acaatagctc ttaaaatggg actgtattgt 4320 tctaaatagt agctctgaca tactgccaca tttaaaactc tgtaatagat tttttatgtc 4380 acctctagca acaattgatg ttgcattgtc atctgagtgc accatccacc taatagtaaa 4440 gtcataatct ttatttctct tcatggcctt ctcataacct agcatagcac aggaatggta 4500 aactgatgac aaataattca gattcccttg cagccagttc atagacactg gaaatgtgtt 4560 agtctctaga ttatctgtca gaactgataa tgccgttcca tatgatccat actctttttg 4620 accacgtttc agattcaaaa agatatctgt tggaatgcac actcgtttga gcttaatgta 4680 cattaaaatg cattcgcaca tcaaatttat ctctccagtt gtcaatatag ggttcataag 4740 aacagccagt atatatttat atgttaagtc tgaagcagac cacttagact ggtctgcaga 4800 aagaaatgcc atcttacatt ccaaattctt ctggagtgat gtgttataat tagtgatagt 4860 atcatatgat aaagaggcta aatttttaat cttgtaatcg cctgatattg aaatagcctc 4920 agatggatca gattgagcta tatgcttgta tgtatgttcg atgaagtata gcatcatttt 4980 agtcttcatg ctcatcaggt aaatttctct gtccatcttc gttctctgca tcttctcaaa 5040 aacagaaaca aggaagttag tatttccagc atttgcccta gttttaagca ttatgaactc 5100 caaaagttgc ataaaagtag ttctatttcc atctaggcct cttccaagct tttctaagga 5160 ctctagatct acctccatga ttttgttgaa ttctttaata agatcatata attcctcact 5220 tacttttttt gacttcaaga ctgtggttgt ttttagatgg ccatatctaa ctttcatgta 5280 tgattctaca gtcaaaggat ggctcttata atagaacttc tctgaacttg ttttcatggt 5340 aactttatca tctccagata atatgttagc aaaaaaatgt atatagtttt taacgttcat 5400 gttttccact tccaagaatg tctgaacaga ttccctatct tcactgaagc attttaaaac 5460 tcctttaaga atatacaaat tatttccctt tattgtactt gggtcttttc catagacatc 5520 tttcaaagca gttgctatct ctgagttttt tataatgtct gatttagagc atttcttgga 5580 tgatgttagg gtttttatct tatatggaac agataagaaa tcttctttgt cttcgatgtt 5640 tgatcgacaa ctagcaacat tgtctatatt ctttctgtag tagtcaaaaa gtgttttaat 5700 gtttaaaaca ccatttatag agaatggacc ggaatcatta aacatgtctt ctttaggtac 5760 aatctcttca tttatcttga atcccattct ttctctgaac tttatttccc actctgcagg 5820 cacactcagt aatgttgtta aattatgaac atgagtgtgc aaagatttag gcatcatata 5880 aattgccaaa tatacattgt tgtaaagaca ctctattgtc ttgagggtgg agcctgttat 5940 agggcaagtt atattcaagt catttatacc tcctgacata tcgttttctt gatctatagt 6000 caacggtttg atgctgttac tcaaatttat ttcctccatc tttagaagga ggctttttat 6060 tcctgcaaca aagaaacaat caacaacatt agttatgtca gggtcaaatt tctctgctat 6120 atattctttt atgttggagt agtcagataa agggagaaac ccagcatacc tcatgaaatc 6180 aaagataccc atgcgactca attttgtgac tgtgcctatg atcacagaag aaaatagaat 6240 tttctgcata ttgtgaatct tgttttcagg gcattcaaat acatttacag atggcttatt 6300 cagccatgat ttaatttcac tgcttaaaag agagtactga gaaaatagaa taggaacctt 6360 gcttggtgct ttgaagaggc ttaatagtct aacttgattt aatctctgag gtctcattat 6420 atttatgtaa tatccatcaa ctaagaaaga aaccaccagt tctttagtgt acaatgatgc 6480 aaaatatggc tgaatctctt tttccacctt gtgcagtgtt atataaggga ctcctgactt 6540 tcctgtattt atcccatcac ctttaaatgc taaacagatc atgctggtgt tagcacaagt 6600 gagtattttg aaatctgtct ttttcatgaa cctatcagca accatgacgc ccttagcaat 6660 ctgcatcatg tcttcactgt aagaataaac cgacaattct gatgcgacgg catgtatatt 6720 tttagcgata attgtttctg tctcgatgag atttccttta gtaaaaatct cctctggatt 6780 cttacagtat tcattgtaga cagagctgat tttcccttca ttcttctttc tactgtctaa 6840 accgtgaagc acatacatgg attctatcat ggatttgcaa taataatcaa catctggatt 6900 gtcatgtctg atcaacttct tctgatgtgt aacagctttc aagcttgtat taagtattgt 6960 ttcactttta gagatgtcat attcccctcc ttcagcttct ttagtgagct taagctgctg 7020 caacttgctc tttaattcat ctttgcaatc agctttcttt ttcttcccca tgccaatatt 7080 cattagagtc agtcccttga agaataattt cttcgctgtg ctagatgttg actgagagat 7140 tgagaattca ttcccattcc ttgtagtcac accatttaca ttcttccaaa tcttagattt 7200 ttctggtctt tggacctgta tgcttccatc ttttacatca accacatcct ctaatgtgat 7260 tttgtcttgg cccgtagtat ctgtactcag atcaactaaa catgttctga ccaaatcaaa 7320 gagagagttc ccaaaatggt gatctgcagc tataccatta taaggcttgt taaatatcag 7380 acggaattct tccaaaaacg acttcctgaa ggagtcaatg atagcattgt tgtagttcat 7440 ctcctccatt attagatcat ctgtcgatgg tgaccaacaa acggaaaaat ttgttttcgt 7500 ctcttgaaga ttatttgtga aacacccagg atattccctc gcataatctt cagcattcat 7560 attgaaagca tcttcaatgc tttctatttg cacttctttt tcttttttag ataccacatc 7620 tttttttatc ttcgtcaaat ggtcgtcata aagctcagat agtagatcat cattagcttc 7680 tagataatct ttcaattctt cttcattttc cgcaggaacc actccaaaca tttcacaatg 7740 gcttttatat ccctcaaatc tgtctttagc atggagatca ctcattgtat ttctaaataa 7800 aacgtaatta ccgaaaatga agttgataat caattctttg caaattttcg gattttttaa 7860 tgaatttata atatctatca catcttttga catttgatta tttgatagat tggttttctt 7920 gtactcatga gaccagtggc taaaaaagac ttcattagat cgattcatat aatcacctac 7980 tctggacagc aataaattct tgaaagtttg agtttctgcg taaaatcgac tgaagcactc 8040 tgaagcatgt cctgttattt gccttaatgt gttaactgaa ataagtttag ataaatttgc 8100 agcttttttt cttccaggga atgttttata tggtgactgc ttgaaatctt gaatcactct 8160 gcaagtggtt acagtgatgt tcatgggacc agttgggttt aatataacta ttgtaataaa 8220 aattggatgt ctttccaaaa acggctcgtc atctattttg atgtctttaa acgttctcca 8280 aacacttgtg taataattct ctgacgtttt tgattctgtc attgcatcta tagacacttt 8340 ccaatcataa atcatcaagc aggccttttc accattagtc tccttatata ttgtataatt 8400 gtctggagtt agatgttgga aaaccaaagt ttccaacagg ctgtcaagat cggttatggt 8460 atttcttata gatgcctttt tatggcagta ttctaggtaa tctataatgc actctttaag 8520 gtaaacatca tgtctgtact taggggcaaa atgaagcctg gtacttgcca gaactccaaa 8580 aaggtcatgg cgcatgagct ctaattcttt atatttatcc agaaacagag atatttggtc 8640 actcatttct ttttgatcga ttgaagatgt actctggtgg tacgaagatt tcatttcttc 8700 tatcttgtcc aagatatggc tcattgacat tattgagttt aatcctgctt ctatggtctc 8760 attaccatca gggaatttcc tttgtatagt gtttgacatt cgcagcagtt catctttaat 8820 attctgtaaa tagacagtaa cttctcctga aatatctagg aaactgttta tcgtttgaat 8880 gttcatttta ctattttatt ttgttgcacg attgctct 8918 //