ID AB060597; SV 1; linear; genomic DNA; STD; VRL; 3246 BP. XX AC AB060597; XX DT 21-OCT-2001 (Rel. 69, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 24 ORF4, ORF3, ORF2, ORF1 genes, complete cds, clone: DE SAa-01. XX KW . XX OS Torque teno virus 24 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3246 RA Okamoto H.; RT ; RL Submitted (21-APR-2001) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi-Ken 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2001.1097. RX PUBMED; 11601907. RA Okamoto H., Nishizawa T., Takahashi M., Asabe S., Tsuda F., Yoshikawa A.; RT "Heterogeneous distribution of TT virus of distinct genotypes in multiple RT tissues from infected humans"; RL Virology 288(2):358-368(2001). XX DR MD5; d71673e748c056adeec7acc4b1900556. DR EuropePMC; PMC3302375; 22171250. DR EuropePMC; PMC434092; 15220423. XX FH Key Location/Qualifiers FH FT source 1..3246 FT /organism="Torque teno virus 24" FT /mol_type="genomic DNA" FT /clone="SAa-01" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687363" FT CDS join(245..630,2510..2951) FT /codon_start=1 FT /transl_table=1 FT /note="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q91CY8" FT /protein_id="BAB69917.1" FT /translation="MSIWRPPLGNVSFRERNWLQACDQSHATFCGCGDFILHLTNLAAR FT FALQGPPPPGGPPRPRPPLLRALPAPEVRRETRTENPGASDEPWPGDGGGSDAAAGGRA FT AGDGGDAYDAGDLEDLFAAVDEEQQQRRLPTRRRLRFTGKKKAHVHRRSPGRGEPPAKR FT AAPTAAAAAGALSPARGAAATRTPTPIHPPRSPQNASGSPPKPPIIRPATNKVYLFEPP FT RGLLPIVGREAWEDEYTTCKYWDRPPRTNHLDTPTYPWMPTNFKVSFKLGFKP" FT CDS join(245..630,2275..2737) FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/TrEMBL:Q91CY7" FT /protein_id="BAB69918.1" FT /translation="MSIWRPPLGNVSFRERNWLQACDQSHATFCGCGDFILHLTNLAAR FT FALQGPPPPGGPPRPRPPLLRALPAPEVRRETRTENPGASDEPWPGDGGGSDAAAGGRA FT AGDGGDAYDAGDLEDLFAAVDEEQQLSRTRVTESSPSLPTPIDNVATYKLLTHQPWAQS FT TPSTHGTGDGGFLVQMLSRECHRNREMLSALQTLSRDPDMFPRQTEKTTDKKKTSLYRK FT KEGARPQKKPRTRRAPRKARRSYSSGSSGSSQSSSRSSSDSDTNSDSSSKKSSKRKRVS FT T" FT CDS 245..634 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q91CY6" FT /protein_id="BAB69919.1" FT /translation="MSIWRPPLGNVSFRERNWLQACDQSHATFCGCGDFILHLTNLAAR FT FALQGPPPPGGPPRPRPPLLRALPAPEVRRETRTENPGASDEPWPGDGGGSDAAAGGRA FT AGDGGDAYDAGDLEDLFAAVDEEQQ" FT CDS 508..2808 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q91CY5" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q91CY5" FT /protein_id="BAB69920.1" FT /translation="MAWRWWWQRRRRWWPRRRRRWRRLRRRRPRRPVRRRRRRATVRRR FT RWRGRRGRRTYTRRAVRRRRRPKKKLVLTQWSPQTVRNCTIRGIVPMVICGHTRAGRNF FT AIHSEDFTSQIKPHGGSFSTTTWSLKVCWDEHQKFMNRWSYPNTQLDLARYLGVTFYFY FT RDQKTDYIVQWSRNPPFKLNKYSSPMYHPGMMMQARKKLMVPSFQTRPRGRKRYRVRIR FT PPNMFADKWYTQEDLCPVPLVQLVVSAASFMHPFCSPLTNNPCITFQVLKDNYYSCIGV FT NSLETHKNSYTKLQEWLYKTNTFFETTQVIAQLSPSFAPAYKPNGTNNNTHKPLGGMVP FT ELKYNNAGFHTGNNPVFGMCKYKPSTLTMQNANKWFWENLQVENDLQSKYGKANLTCME FT YHTGIYSSIFLSPQRNLQFPAAYLDVTYNPNCDRGIGNKIWFQYSTKMTTDFEQKQCKC FT VLENIPLWSAFHGYPDFIEQELSISAEIHNFGLVCFICPYTFPPCYNKTKPEQGYVFYD FT TTFGNGKMPDGSGHIPIYWQQRWFIRLAFQTQVMHDLVMCGPFSYKDDLANTTITARYK FT FRFKWGGNIIPEQIIKNPCHREQSLASYPDRQRRDLQVVDPSTMGPIYTFHTWDWRRGL FT FGTDAIQRVSQKPGDALRITNPFKRPRYVPPTDREDYRQEEDFALQEKRRRTSTEEAQD FT EESPPQSAPLLQQRQQRELSVQLAEQQRLGHQLRFILQEVLKTQAGLHLNPLLLGPRPT FT RSISLSPLEDSSP" XX SQ Sequence 3246 BP; 900 A; 912 C; 794 G; 640 T; 0 other; ctgagttttc cacgcccgtc cgcagcggca gagccacgga gggagtccgc cgcgtcccga 60 gggcgggtgc cggaggtgag tttacacacc gcagtcaagg ggcaattcgg gctcgggact 120 ggccgggcta tgggcaaggc tcttaaagcg tacgtccccc actatgtttc tcggcagggt 180 ctggaggaga cagaaaagga aagtgcttct gctggctgtg cgaactccac aggagacatc 240 ttccatgagt atctggcgac cacccctcgg gaatgtctcc tttagggaga gaaattggct 300 tcaggcctgt gaccaatccc acgctacttt ttgcggctgt ggtgatttta ttctgcacct 360 tactaatctg gctgcacgtt ttgctcttca ggggcccccg ccaccgggtg gtcctcctcg 420 gccgaggccg ccgctcttga gagcgctgcc ggcccccgag gtccgcaggg agacccgtac 480 cgagaacccg ggcgcctcgg atgaaccatg gcctggcgat ggtggtggca gcgacgccgc 540 cgctggtggc cgcgccgccg gagacggtgg agacgcctac gacgccggag acctagaaga 600 cctgttcgcc gccgtcgacg aagagcaaca gtaaggaggc ggaggtggag gggcagacgt 660 gggcgacgca catataccag acgcgcggtc agacgcagac gcaggcccaa aaagaaactc 720 gtactgacgc agtggagccc ccagactgtc agaaactgca ccatcagggg catagtcccc 780 atggtgatat gcgggcacac tagggccggt agaaactttg ccattcacag cgaagacttc 840 acctcccaga taaagcccca cggaggtagc ttcagcacta caacctggtc tctaaaagta 900 tgctgggacg agcaccagaa attcatgaac aggtggtcgt accccaatac tcagctggac 960 ctagccaggt acctgggggt caccttctac ttctacagag accaaaaaac agactatata 1020 gtccagtgga gtagaaatcc cccatttaag ctcaacaagt acagcagccc catgtaccac 1080 ccaggcatga tgatgcaggc cagaaaaaaa ctgatggttc ccagtttcca gacgagaccc 1140 cggggtagaa agagatacag ggttagaata agacccccca acatgtttgc agataagtgg 1200 tacactcaag aggacctgtg tccggtaccc cttgtgcaac ttgtggtttc tgcggctagc 1260 ttcatgcatc cgttctgctc accactaacg aacaaccctt gcatcacctt ccaagttttg 1320 aaagacaact attacagttg cataggagtt aactccttag agacccataa aaacagttat 1380 actaagttac aagaatggtt atataagaca aacacattct ttgaaacaac acaagtaata 1440 gctcagctat ctccctcatt tgcacctgca tacaaaccca atggaactaa caacaacaca 1500 cataagccat taggaggaat ggttccagag ttaaaataca acaatgccgg cttccataca 1560 ggtaacaacc cagtttttgg catgtgtaaa tacaaaccaa gcacactcac aatgcaaaat 1620 gccaataagt ggttttggga aaacctacaa gtcgaaaatg acttacaatc aaagtatgga 1680 aaagccaact taacgtgtat ggaataccac acaggcatat acagctccat attcctaagt 1740 cctcagagaa acctacagtt ccccgcagca tacctagatg taacatataa ccctaactgt 1800 gacagaggca taggaaacaa aatctggttc cagtatagca caaaaatgac cacagatttt 1860 gaacagaaac agtgcaagtg tgtccttgaa aatattcccc tatggtcagc gtttcacggg 1920 tacccagact ttatagagca agaactcagc ataagcgcag agatccacaa ctttgggtta 1980 gtgtgcttca tatgccccta cacatttccc ccatgctata acaaaaccaa acctgagcaa 2040 ggatatgtat tttatgatac cacctttggc aatggaaaaa tgccagacgg gtcgggacac 2100 atacccatct actggcagca gagatggttt ataagactgg cctttcagac ccaggtaatg 2160 cacgaccttg tcatgtgcgg accctttagc tacaaagatg acctagctaa tactacaata 2220 acagccagat acaagtttag atttaaatgg ggcggtaata tcatccccga acagattatc 2280 aagaacccgt gtcacagaga gcagtccctc gcttcctacc ccgatagaca acgtcgcgac 2340 ctacaagttg ttgacccatc aaccatgggc ccaatctaca ccttccacac atgggactgg 2400 cgacgggggc tttttggtac agatgctatc cagagagtgt cacagaaacc gggagatgct 2460 ctccgcatta caaacccttt caagagaccc agatatgttc ccccgacaga cagagaagac 2520 taccgacaag aagaagactt cgctttacag gaaaaaagaa ggcgcacgtc cacagaagaa 2580 gcccaggacg aggagagccc cccgcaaagc gcgccgctcc tacagcagcg gcagcagcgg 2640 gagctctcag tccagctcgc ggagcagcag cgactcggac accaactccg attcatcctc 2700 caagaagtcc tcaaaacgca agcgggtctc cacctaaacc ccctattatt aggcccgcga 2760 ccaacaaggt ctatctcttt gagcccccta gaggactcct ccccatagtg gggagagagg 2820 cctgggagga cgagtacacc acctgcaagt actgggaccg ccctcccaga accaatcact 2880 tagacacccc tacctacccc tggatgccca ccaactttaa ggtcagcttc aaacttggat 2940 ttaaacccta aataaaaaag gcaaggccgt tgactgttca cttgtcggtg tctacctcta 3000 taagtcacta agcactccga gcgcagcgag gagtgcgacc ctaggggtgg gtgcaacgcc 3060 ctcggcggcc gcgcgctacg ccttcggctg cgcgcggcac ctcggacccc cgctcgtgct 3120 gacacgctcg cgcgtgtcag accacttcgg gctcgcgggg gtcgggaatt ttgctaaaca 3180 gactccgagt tgccattgga cactgtagct gtgaatcagt aacgaaagtg agtggggcca 3240 gacttc 3246 //