ID AB060594; SV 1; linear; genomic DNA; STD; VRL; 3234 BP. XX AC AB060594; XX DT 21-OCT-2001 (Rel. 69, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 20 ORF4, ORF3, ORF2, ORF1 genes, complete cds, clone: DE SAa-10. XX KW . XX OS Torque teno virus 20 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3234 RA Okamoto H.; RT ; RL Submitted (21-APR-2001) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi-Ken 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2001.1097. RX PUBMED; 11601907. RA Okamoto H., Nishizawa T., Takahashi M., Asabe S., Tsuda F., Yoshikawa A.; RT "Heterogeneous distribution of TT virus of distinct genotypes in multiple RT tissues from infected humans"; RL Virology 288(2):358-368(2001). XX DR MD5; d512dd4d5d800f5fffd83014137a64b4. DR EuropePMC; PMC434092; 15220423. XX FH Key Location/Qualifiers FH FT source 1..3234 FT /organism="Torque teno virus 20" FT /mol_type="genomic DNA" FT /clone="SAa-10" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687359" FT CDS join(244..629,2536..2938) FT /codon_start=1 FT /transl_table=1 FT /note="ORF4" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q91CZ9" FT /protein_id="BAB69905.1" FT /translation="MSLWRPPMRHVPSRERDWVEAAFRAHAAFCGCTNPVIHFTSVLAR FT FNLQGGPQTPPDDPPEGAPVLGALPAPSPRRHTRSENPGPQQWPTGGAAAAGRGDGDGG FT AADAADEYRAEDIDDLFAAIERDTQSRRRGKARRKLHFRGRKHPYLARRDADTTTQSPA FT PKAAPRPARATSPAQAPLPPSPQNPGGGPPQSPTIHPAVNRVYLFPEREAKPAPTRGDW FT ETEMQACKAFDRPMRSNLSNSPFYPWMPSYRVSFRLGFKP" FT CDS join(244..629,2307..2805) FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="InterPro:IPR004118" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/TrEMBL:Q91CZ8" FT /protein_id="BAB69906.1" FT /translation="MSLWRPPMRHVPSRERDWVEAAFRAHAAFCGCTNPVIHFTSVLAR FT FNLQGGPQTPPDDPPEGAPVLGALPAPSPRRHTRSENPGPQQWPTGGAAAAGRGDGDGG FT AADAADEYRAEDIDDLFAAIERDTQPSKIPARTDKTPIPIDTLEMYKLQTRLPWGLDTP FT STSGTGDVGGLVTKLSKECSRNRSILNSIQSLQRDLDCSPQQKQKERKSKKKAPLQRKK FT APLSRKKRRRHNYSESSSESSSATSESYESSSSTSSTKSSKPRRGSTSIPYYSSSGKQG FT VFVPRERGKARSY" FT CDS 244..633 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q91CZ7" FT /protein_id="BAB69907.1" FT /translation="MSLWRPPMRHVPSRERDWVEAAFRAHAAFCGCTNPVIHFTSVLAR FT FNLQGGPQTPPDDPPEGAPVLGALPAPSPRRHTRSENPGPQQWPTGGAAAAGRGDGDGG FT AADAADEYRAEDIDDLFAAIERDTQ" FT CDS 504..2756 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q91CZ6" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q91CZ6" FT /protein_id="BAB69908.1" FT /translation="MAYWWRRRRWPWRRRWRRRGRRRRVPRRRYRRPVRRYRKRYTVRR FT RRRRGRRGRPRRRLYRRRYTLRRKRKRLIIKQWQPNNIRKCRITGMLPMVICGHGMSAN FT NYAIRSDDTETMKFSFGGGFSTTTFTLKVLYDQHLRGMNKWSTSNDILDLARYLGCDFY FT FYRDKHTDYIVQYDTAAPFTIDKDSSANYHPGVLIKARKKVLVPSYDTHPKGRAKIKIH FT IEPPKMFVDKWYAQHDLCDVELVSFVVSLASFQHPFCRPQTDNPCVTFQVLQNFYNKCI FT GTSVNLSDSTFDSIFRDYLYKIGSFYQQVLVPSYIKRITHNPDGSTGGTLSTLTAYNEW FT VTGTGPNKFIPGNTSVHYNFCTYNPKYDNLKALRSYYFHWETVQSVATSNFNAQHVPIT FT STMPTKDYWEYRIGMFSPTFLSPYRTSPIENWPMAYRDISYNPLNDKVVGNKLWLQSIV FT KADTQFHIPSCTYVLEDKPLWAACFGYRDFIKSVKEKQDPDFEYIVCVICPYTIPPLFD FT DKNPLMGYVFYDTNFGNGKWLDGSGLVPVEMQSRWRPYLAFQTKVMTDIAMSGPFSYPD FT ELKNTTINAKYKFRFKWGGNMIYQQTIKNPCTDGQDPHSYRHPRDVQVADPLTVGPRYA FT FHQWDWRRGWLGDKALKRMLQKPLDLEFYPIAPKRPRLFPPTEAEGEEKQEESSTSEEE FT STLISQEETPTQLLRVQLRKQLRDQRELRVQLKHLFHQVLKTQAGVHLNPLLFIQR" XX SQ Sequence 3234 BP; 933 A; 851 C; 766 G; 684 T; 0 other; ctgagttttc cacgcccgtc cgcagcgaga tcgcgacgga ggagcgatcg agcgtcccga 60 gggcgggtgc cggaggtgag tttacacacc gcagtcaagg ggcaattcgg gctcgggact 120 ggccgggcta tgggcaaggc tcttagggtc ttcattctta aaatgtttct cggcagagtg 180 taccgccaga agaaaaggaa actgctactg ctggctgtgc agactccacc ggaggcatct 240 tccatgagtc tgtggcgtcc cccgatgaga catgtcccct caagggagag agattgggtc 300 gaggccgcgt tcagagccca cgctgctttt tgtggctgta ctaatcctgt tattcacttc 360 actagtgtac ttgcacgttt taatcttcaa ggaggcccgc agacaccacc ggacgacccg 420 cctgagggtg cgccggtgct gggggccctt ccagccccga gcccgcggag acacacccgg 480 agcgagaacc cgggacctca gcaatggcct actggtggcg ccgccgccgc tggccgtgga 540 gacggagatg gaggcgccgc ggacgccgca gacgagtacc gcgcagaaga tatcgacgac 600 ctgttcgccg ctatcgaaag agatacacag taaggaggcg cagacggaga gggaggcgag 660 ggcgaccgag acgcagactg tacagacgca ggtacaccct cagacgaaag agaaagagac 720 tgataattaa acagtggcag ccaaataata ttagaaaatg tagaataaca ggcatgctgc 780 ccatggttat atgtggacac ggtatgagtg ccaataacta tgccataagg tctgatgata 840 cagagactat gaaattctcc tttggaggtg gcttcagcac caccacattc actctaaagg 900 tactatatga tcagcaccta agaggcatga acaaatggag cacatccaat gacattctag 960 acctggccag atacctaggc tgtgactttt acttctacag agacaaacac acagactata 1020 tagtacagta tgacacagca gctcctttca ctatagataa agacagctca gccaactacc 1080 acccgggggt actaattaaa gctagaaaga aagtcctggt gcccagctat gacacgcacc 1140 ccaagggtcg cgctaaaata aaaatacaca tagaacctcc taaaatgttc gttgataaat 1200 ggtatgcaca gcatgacctg tgcgacgttg agcttgtgtc atttgtggtt agcctagctt 1260 ccttccaaca tccgttctgc cgaccacaaa ctgacaatcc ttgtgtaacc ttccaagttc 1320 tgcaaaattt ctacaacaaa tgcattggta cttccgttaa cctgtcagac agtacctttg 1380 actccatatt tagagactat ttatataaaa tagggtcttt ttatcaacaa gtattagtac 1440 ccagctacat caaaagaatc acacacaacc ctgatggctc cactggagga acactcagta 1500 cactaactgc atacaatgag tgggttacag gtacaggacc aaacaaattc ataccaggaa 1560 acacatctgt acactataac ttttgcacat acaatcccaa gtatgacaac ctaaaagctc 1620 tcagaagtta ctattttcac tgggaaacgg tacaatcagt agctacctca aactttaatg 1680 ctcaacacgt acctattaca tccactatgc ctacaaaaga ctactgggaa tacagaatag 1740 gcatgttctc tccaacattc ctcagtcctt atagaacaag cccaatagaa aactggccca 1800 tggcctacag agacatatcc tacaatccac taaatgacaa agtagtaggt aacaaattat 1860 ggctgcaaag tatagtgaaa gctgatacac agtttcatat accctcctgc acctacgtgc 1920 tggaggacaa gccactgtgg gccgcgtgct ttgggtatag agactttatt aagagtgtaa 1980 aagaaaaaca agacccggac tttgaatata tagtatgtgt gatatgtccc tatactatac 2040 cacccttatt tgatgacaaa aaccccctaa tgggctatgt attttatgac acaaactttg 2100 gcaatggaaa gtggttggac ggatcaggac tggtaccggt ggagatgcaa agcaggtgga 2160 gaccatacct agcttttcag acgaaagtaa tgactgacat agccatgagc ggaccgttca 2220 gctacccgga cgaactaaaa aacactacta taaatgccaa gtacaaattc agattcaaat 2280 ggggtggtaa tatgatttat cagcagacca tcaaaaatcc ctgcacggac ggacaagacc 2340 cccattccta tagacaccct agagatgtac aagttgcaga cccgcttacc gtggggccta 2400 gatacgcctt ccaccagtgg gactggcgac gtgggtggct tggtgacaaa gctctcaaaa 2460 gaatgctcca gaaaccgctc gatcttgaat tctatccaat cgctccaaag agacctagac 2520 tgttcccccc aacagaagca gaaggagagg aaaagcaaga agaaagctcc acttcagagg 2580 aagaaagcac ccttatctcg caagaagaga cgccgacaca actactcaga gtccagctcc 2640 gaaagcagct ccgcgaccag cgagagctac gagtccagct caagcacctc ttccaccaag 2700 tcctcaaaac ccaggcgggg gtccacctca atcccctact attcatccag cggtaaacag 2760 ggtgtatttg ttcccagaga gagaggcaaa gcccgctcct actagaggag actgggagac 2820 cgagatgcag gcctgtaaag ccttcgacag gcctatgaga agcaacctct ctaattcccc 2880 cttctacccc tggatgccct cctacagagt cagcttcaga ctcggtttta aaccctaaat 2940 aaaaatttca aggccgtgca ctgttcactt gtcggtgtct acctcttaag gtcactaagc 3000 actccgagcg tcagcgagga gtgcgaccct ctgccctggt gcaacgccct cggcggccgc 3060 gcgctacgcc ttcggctgcg cgcggcacct cggacccccg ctcgtgctga cacgctcgcg 3120 cgtgtcagac cacttcgggc tcgcgggggt cgggaaattt gctaaacaga ctccgagttg 3180 ccattggact caggagctgt gaatcagtaa cgaaagtgag tggggccaga cttc 3234 //