ID AB055008; SV 1; circular; genomic DNA; STD; VRL; 2764 BP. XX AC AB055008; XX DT 22-MAR-2002 (Rel. 71, Created) DT 13-JAN-2009 (Rel. 99, Last updated, Version 6) XX DE Tobacco leaf curl Japan virus-[JP2] DNA, complete genome, isolate: DE TLCV-Jp2. XX KW . XX OS Tobacco leaf curl Japan virus-[JP2] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2764 RA Kitamura K., Ikegami M.; RT ; RL Submitted (25-JAN-2001) to the INSDC. RL Contact:Masato Ikegami Tokyo University of Agriculture, Depertment of RL Bioscience, Faculty of Applied Bioscience; 1-1-1 Sakuragaoka, Setagaya-ku, RL Tokyo 156-8502, Japan XX RN [2] RX DOI; 10.1007/s00705-003-0276-5. RX PUBMED; 15168208. RA Kitamura K., Murayama A., Ikegami M.; RT "Evidence for recombination among isolates of Tobacco leaf curl Japan virus RT and Honeysuckle yellow vein mosaic virus"; RL Arch. Virol. 149(6):1221-1229(2004). XX DR MD5; 18aa368c1996c887010246c832c82f8f. XX FH Key Location/Qualifiers FH FT source 1..2764 FT /organism="Tobacco leaf curl Japan virus-[JP2]" FT /host="Lycopersicon esculentum" FT /strain="Nara" FT /isolate="TLCV-Jp2" FT /mol_type="genomic DNA" FT /clone="pTLN13" FT /db_xref="taxon:223333" FT CDS 147..497 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /db_xref="GOA:Q8QXC6" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q8QXC6" FT /protein_id="BAB86380.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLLAVEATYSPDTIGYDLLRDL FT IGVVRAKNYVEASCRYRDFHSRLQSTAPSELRQPVCQPCECPHCPRHKQKEIMGPKAHL FT SEAQDVQNVSKP" FT CDS 307..1074 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q8QXC5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q8QXC5" FT /protein_id="BAB86381.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYANRASAPIALATNRRRSW FT AQRPIYRKPRMYRMYRSPDVPKGCEGPCKVQSYEKKNDVGHSGTLLCVSDITRGNGLTH FT RLGKRFCIKSVYIIGKIWMDENIKTKNHTNNVLFWLVRDRRPGTTPYGFQEAFNMFENE FT PSTATVKQELRDRLQALHRFRATVTGGQYASKEQAIIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSV" FT CDS complement(1077..1481) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /db_xref="GOA:Q8QXC4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q8QXC4" FT /protein_id="BAB86382.1" FT /translation="MDSRTGDTITAAQAWNGAYIWTVPNPLYFKITNHAQRPFNMDQDI FT ITIQIQFNHNLRSQLDLHKCFLIFKIWTHLQPLTSYFLNVFSKRVLEYLDNLGVISINN FT VIRAVDYVLYDVLRGTQYVQQSSDIKFKLY" FT CDS complement(1222..1629) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /db_xref="GOA:Q782L2" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q782L2" FT /protein_id="BAB86383.1" FT /translation="MRPSSPSTAHSTQLPIKVQHKLGKKRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGMEWRVYLDSAKSPIFQNHEPRSTTVQHGSGHNNNTDSVQPQ FT PQISTGSTQVLPDLQDLDSLTTSDFLFLECI" FT CDS complement(1529..2620) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q8QXC3" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q8QXC3" FT /protein_id="BAB86384.1" FT /translation="MAPPKRFKTNSKNYFLTYPHCTLTKEEALSQIQALETPTNKLFIR FT ICRELHEDGSPHLHVLIQFEGKYQCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDVIDYGVFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVLQFH FT NLNSNLDRIFSPQLEEFVCPFSPSSFDRVPEELEEWAAETVREFAARPWRPISIVIEGD FT SRTGKTMWARSLSPHHNYLCGHLDLSPKVYSNSAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNASFVTLYGP FT LYSTSHQGSAQIREEESTSQTED" FT CDS complement(2170..2463) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q8QXC2" FT /protein_id="BAB86385.1" FT /translation="MGALISTFSSSSKENTSAQINDSSISSPQLGQHISIQTFRELRAR FT QTSKPIWKKTETSLIMEFSRSMEDQLEEVANLPTTLMPRQSTQALNHRPCLY" XX SQ Sequence 2764 BP; 733 A; 554 C; 630 G; 847 T; 0 other; tataatatta ccggatggcc gcccgaaatt tcgtggtggt cccccccctg tcggccaatg 60 ttatgcgttc ctggaacgtt agataagtgg aaagtgacgt atgcttttgt ctttatatac 120 gtcagcccta attttaaagt ttaaccatgt gggatccttt acttaacgag ttcccagaaa 180 ccgttcacgg ttttaggtgt atgcttgcgg ttaagtacct gttagcggtt gaagctacat 240 actctcctga tactataggt tacgatttgc ttcgtgatct tataggtgtg gttcgtgcga 300 agaactatgt cgaagcgtcc tgcagatata gggattttca ctcccgtctc caaagtacgg 360 cgccgtctga acttcgacag cccgtatgcc aaccgtgcga gtgcccccat tgccctcgcc 420 acaaacagaa ggagatcatg ggcccaaagg cccatctatc ggaagcccag gatgtacaga 480 atgtatcgaa gccctgatgt gcccaagggg tgtgaaggtc cgtgtaaggt ccagtcatat 540 gagaagaaaa atgatgttgg tcattctggt actctgcttt gtgtatccga tattacccgt 600 ggtaatgggc ttactcatcg tcttgggaag agattttgta taaaatctgt ttatataatt 660 ggtaaaatat ggatggatga gaatattaag acgaagaatc acactaacaa cgtgttattc 720 tggttagtta gagatagacg acctggtaca actccttatg gatttcagga ggcattcaat 780 atgtttgaga acgagcccag cacagcaact gttaaacagg aattaagaga tcgtttgcag 840 gctttacaca gattccgtgc cactgttact ggtggacaat atgcgtctaa ggagcaagcg 900 atcataaagc gtttttggaa gctcaatcat catgttactt ataatcatca ggagcaggct 960 aaatatgaga atcatactga aaatgcttta ttattgtata tggcttgtac acatgccagt 1020 aatcctgtgt atgctactct aaagatcaga gtgtatttct acgattcagt ataaaattaa 1080 taaagtttga attttatatc acttgattgt tgtacatact gtgttcctct caatacatcg 1140 tataatacat aatcaactgc cctaattaca ttgttaattg aaattacacc caaattatct 1200 aaatactcta atacacgttt actaaataca ttcaagaaat aagaagtcag aggttgtaag 1260 tgagtccaga tcttgaagat caggaagcac ttgtgtagat ccagttgaga tctgaggttg 1320 tggttgaact gaatctgtat tgttattatg tcctgatcca tgttgaacgg tcgttgagcg 1380 tggttcgtga ttttgaaata taggggattt ggcactgtcc agatatacgc gccattccat 1440 gcctgagctg cagtgatggt gtcccctgtg cgtgaatcca tggttagcac aacctagagc 1500 gacgtaaata gaacaaccgc agtttaagtc aatcctccgt ctgcgaggtg ctctcttctt 1560 ccctaatttg tgctgaacct tgatgggaag ttgagtagag tgggccgtag agggtgacga 1620 aggacgcatt tttaattgcc catgctttta gtgctgcgtt cttgtcctca tctaaatact 1680 cggtgtatga tgacgttggg cctggattgc agaggaagat tgttgggata ccacctttaa 1740 tttgaattgg tttcccgtac ttggtgttgc tttgccagtc tctttgggcc cccatgaatt 1800 ctttaaagtg ctttagatag tggggatcca cgtcatcaat cacgttgtac caagcactgt 1860 tgctgtaaac cttggggctt aagtcaagat ggccgcaaag gtaattgtga tgtgggctca 1920 acgacctggc ccacatggtc ttccctgtcc tgctatcccc ttcaatcaca atgcttatgg 1980 gcctccacgg ccgcgcagca aattccctga cggtctctgc agcccattcc tcgagttctt 2040 ccggaactcg atcaaaggaa gaaggagaaa aaggacaaac aaattcctcc aattgaggac 2100 taaaaatcct atctaaatta ctatttaaat tatgaaattg taaaacaaaa tctttgggag 2160 ctttctccct taatatagac aaggccgatg atttagagcc tgagttgatt gcctcggcat 2220 aagcgtcgtt ggcagattgg caacctcctc tagctgatct tccatcgacc tggaaaactc 2280 cataatcaat gacgtctccg tctttttcca tataggtttt gacgtctgac gagctcttag 2340 ctccctgaat gtttggatgg aaatgtgctg acctagttgg ggagacgaga tcgaagaatc 2400 gttgatttgt gcactggtat tttccttcga actggatgag aacgtggaga tgagggctcc 2460 catcttcgtg tagttctctg caaattctga tgaacaattt atttgttggt gtttctaggg 2520 cttgaatctg ggaaagggct tcttctttgg ttagagtgca gtgtgggtat gtgaggaaat 2580 aatttttgct atttgtttta aaacgctttg gtggtgccat atttacaaat atgcccttgt 2640 accccgattc ggagagaaat cttctatgca gtcaatcggt gtaatggggt acaatatata 2700 ctcctccttc ttttttattt tgaaattcaa aattgaaaat tcaaattgat aaagcggcca 2760 tccg 2764 //