ID   AB049568; SV 1; linear; genomic RNA; STD; VRL; 2223 BP.
XX
AC   AB049568;
XX
DT   02-OCT-2001 (Rel. 69, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Cucumber mosaic virus genes for 3a protein, coat protein, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2223
RA   Masuta C., Seshimo Y., Mukohara T.;
RT   ;
RL   Submitted (01-OCT-2000) to the INSDC.
RL   Chikara Masuta, Hokkaido University, Graduate School of Agriculture;
RL   Kita-ku, Kita 9, Nishi 9, Sapporo, Hokkaido 060-8589, Japan
RL   (E-mail:masuta@res.agr.hokudai.ac.jp, Tel:81-11-706-2483,
RL   Fax:81-11-706-2483)
XX
RN   [2]
RA   Masuta C., Seshimo Y., Mukohara T.;
RT   "Cucumber mosaic virus RNA 3 lily strain (HL)";
RL   Unpublished.
XX
DR   MD5; df323035121219bb9a1b3364a26015ac.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2223
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="HL"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             118..957
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q91DE2"
FT                   /protein_id="BAB69048.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFYKSGYDVGELRSKGYMSVPQVLCAVTRTVSADAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYVLTNARIDQNARSESEELNVESPPAAIGSSTASRSEAFRPQVVNGL"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9DJX6"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9DJX6"
FT                   /protein_id="BAB69049.1"
FT                   /translation="MDKSESTSAGRSRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2223 BP; 520 A; 522 C; 533 G; 648 T; 0 other;
     gtaatcttac cactgtgtgt gtgtgtgtgt gtgtgtgtcg tgtcgtgtcg tgttgtccgc        60
     acatttgagt cgtgctgtcc gcacatttat ttcagtgagt gatagattac ccgaggcatg       120
     gctttccaag gtaccagtag gactttaact caacagtcct cagcggctac gtctgacgat       180
     cttcaaaaga tattatttag ccctgaagcc attaagaaaa tggctactga gtgtgaccta       240
     ggccggcatc actggatgcg cgctgataac gctatttcag tccggcccct cgttcccgaa       300
     gtaacccacg gtcgtattgc ttccttctat aagtctggat atgatgttgg tgaattacgc       360
     tctaaaggtt atatgagcgt ccctcaagta ttgtgtgctg ttactcgaac agtttccgcc       420
     gatgctgaag gatctttgag aatttacctg gctgatctag gcgacaagga gttatctccg       480
     atagacggac aatgcgtctc attacataat catgatcttc ccgctttagt gtctttccaa       540
     ccgacgtatg attgtcctat ggagacagtt gggaatcgta agcggtgttt tgctgttgtt       600
     atcgaaagac atggttatat tgggtatacc ggcaccacag ctagcgtgtg tagtaattgg       660
     caagcacggt tctcttctaa gaacaacaac tacactcata tcgcagctgg gaagactctg       720
     gtactgcctt tcaacagact agctgagcaa acaaaaccgt cagctgttgc tcgcctgttg       780
     aagtcgcaat tgaacaatat cgaatcctcg caatatgtgt taacgaacgc gaggattgat       840
     caaaatgcgc gcagtgagtc cgaggaatta aatgttgaaa gccctcccgc cgcaatcggg       900
     agttctaccg cgtcccgctc cgaagccttc agaccgcagg tggttaacgg tctttagcac       960
     tttggtgcgt attagtatat aatatgtgtg tgtgtcttta cctactatat attatatcta      1020
     tagagtcctg tgtgagttga tacagtagac atctgtgacg cgatgccgtg ttgagaaggg      1080
     aacacatctg gttttagtaa gtccacatca tagttttgag gttcaattcc tcttactccc      1140
     tgttgggatc cttactttct catggatgct tctccgcgag attgcgttat tgtctactga      1200
     ctatatagag agtttgtgct gtgttttctc ttttgtgtcg tagaattgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgccggtcgt agccgtcgac gtcgtccgcg tcgtggttcc      1320
     cgctccgccc cctcctccgc ggatgctaac tttagagtct tgtcgcagca gctttcgcga      1380
     cttaataaga cgttagcagc tggtcgtcca actattaacc acccaacctt tgtagggagt      1440
     gaacgctgta aacctgggta cacgttcaca tctattaccc taaagccacc aaaaatagac      1500
     cgtgggtctt attatggtaa aaggttgtta ttacctgatt cagtcacgga atatgataag      1560
     aaacttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttcaaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggacttat ccgttgccgc catctctgct      1680
     atgtttgcgg acggagcctc accggtactg gtttatcagt acgctgcatc cggagttcaa      1740
     gctaacaaca aattgttgta tgatctctcg gcgatgcgcg ctgatatagg cgacatgaga      1800
     aagtacgccg tcctcgtgta ttcaaaagac gatgcactcg agactgacga gttagtactt      1860
     catgttgacg tcgagcacca acgtattccc acatctggag tgctcccagt ctgattccgt      1920
     gttcccagga ccctccctcc gtttctacgg cgggagctga gttggcagta ttgctacaaa      1980
     ctgtctgaag tcgttaaatc agtgtgtcat tgtacacatt gtggcgaacg ggttgtccat      2040
     ccagcttacg gctaaaatgg tcagtcgtgg agaaatccac gccagtagac ttacaagtct      2100
     ctgaggcacc cttgaaacca tctcctaggt ttcttcggaa ggacttcggt ccgtgtactt      2160
     ctagcacaat gtgctagttt agggtacggg tgtccacttt cgtggggctt ccaaaggaga      2220
     cca                                                                    2223
//