ID AB044292; SV 2; linear; genomic RNA; STD; VRL; 4046 BP. XX AC AB044292; XX DT 10-JAN-2002 (Rel. 70, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat DE protein, complete cds, isolate:NK. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-4046 RA Ohshima K.; RT ; RL Submitted (05-JUN-2000) to the INSDC. RL Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of RL Plant Virology; 1-banchi,Honjo-machi, Saga, Saga, 840-8502, Japan RL (E-mail:Ohshimak@cc.saga-u.ac.jp, Tel:0952-28-8730, Fax:0952-28-8709) XX RN [2] RA Ohshima K., Ando T., Motomura N., Matsuo K., Sako N.; RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot RT virus isolates"; RL Unpublished. XX RN [3] RA Ohshima K., Tsuyu A., Motomura N., Matsuo K., Sako N.; RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot RT virus isolates"; RL Unpublished. XX DR MD5; 68e39027fecbc713005aec51348dbc3c. XX FH Key Location/Qualifiers FH FT source 1..4046 FT /organism="Melon necrotic spot virus" FT /isolate="NK" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:11987" FT CDS 93..2468 FT /codon_start=1 FT /transl_except=(pos:897..899,aa:OTHER) FT /product="p89" FT /note="The readthrough amino acid has not been identified" FT /note="readthrough product" FT /db_xref="GOA:Q8V992" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8V992" FT /protein_id="BAB82513.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVFNPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND FT KKDLEPAPKPLSGVFDRLTWFRRKLHNIVGTHSSISPGQFLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTRKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRR FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRFDQHVSSDALKWEHSVY FT LDAFCHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSPGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEVFEQIE FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGVNHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKNGAISEDARFSFYLAFGIT FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL" FT CDS 93..899 FT /codon_start=1 FT /product="p29" FT /db_xref="UniProtKB/TrEMBL:Q8V991" FT /protein_id="BAB82514.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRTPGITNSIITYGEEVVEQVKVDIDE FT DAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVFNPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2447..2833 FT /codon_start=1 FT /transl_except=(pos:2642..2644,aa:OTHER) FT /product="p14" FT /note="The readthrough amino acid has not been identified" FT /note="readthrough product" FT /db_xref="GOA:Q8V990" FT /db_xref="InterPro:IPR007982" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8V990" FT /protein_id="BAB82515.1" FT /translation="MDSQRTVEQTNPRGRIKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN FT TYVHHFDNSSVKTQYVGISTNGDG" FT CDS 2447..2644 FT /codon_start=1 FT /product="p7A" FT /db_xref="GOA:Q8V989" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q8V989" FT /protein_id="BAB82516.1" FT /translation="MDSQRTVEQTNPRGRIKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2648..2833 FT /codon_start=1 FT /product="p7B" FT /db_xref="GOA:Q8UYH9" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8UYH9" FT /protein_id="BAB82517.1" FT /translation="MACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN FT SSVKTQYVGISTNGDG" FT CDS 2820..3992 FT /codon_start=1 FT /product="p42 coat protein" FT /db_xref="GOA:Q8V988" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q8V988" FT /protein_id="BAB82518.1" FT /translation="MAMVKRINNLPTVKLAKQALPLLTNPKLVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGAKPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSAPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST FT IKGVNYIADRDVITTGGNIGVNINIPGTYLVTIVLNVTSIGSLTFTGNSKLVGNSLNVT FT SSGASALTFTLNSTGVPNSTNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 4046 BP; 1030 A; 842 C; 988 G; 1186 T; 0 other; tttgttcttt ccacggatcc ccgacttctt cggttttgac agttagttag ttcgtatata 60 aggttatctc tcttaatcaa tacaggttag caatggatac tggtttgaaa tttcttgttt 120 ctggaggttt agccacctca tctgttatta ggaaagtgag tgctgtgagt tcattggatt 180 cgtcccttcc ttcatcgtct atactatctg ccattcatgg gtcttggact agtgctatca 240 gccacgattg tagcaagatt gccaaggttg ccaccgtgat tggaattggt tatcttgggg 300 ttcggattgg tgccgcatgg tgtcgtcgta cccccgggat aacgaattct ataattacat 360 acggggaaga agtggttgag caagtaaagg tggatattga tgaagatgct gaagaggagt 420 ccgatactgg tgaggaaatt gtggttggca cgataggtat tggcatacac actaacgtca 480 accctgaggt tcgagctaag cgcagacata gatcgaggcc attcattaag aagattgtga 540 atttaacgaa aaatcacttt ggtggatgtc ccgattcaag taaatcgaac gtcatggctg 600 ttagcaaatt tgtttatgaa caatgtaaac agcacaattg tcttccacat cagacaagat 660 tgatcatgag tgttgcggtt ccattggtgt ttaatcccga catgtacgac atttccagta 720 aagctctgtt aaacagcgag atattgacag aaaacagagc tacgctggac cgcctcaaaa 780 ctcttgacgg gtggctgtca catttagtgt gccaccccct cagcacgaag gcttggaggc 840 gggcgattga caacttgtgt ggtcttcctg attggaaggc cttcaagttg gtcaactagg 900 ggtgcctaga ggaactcgct gggttctgta cttcggtacg gagggggacg cacccagaca 960 tgaccgagtt tcctcaggat cgtcccatta agacacgcaa actgtattgt ttggggggag 1020 ttggaactag cgttaagttc aatgtacaca ataactctct agctaacctt cggcgcggtc 1080 ttatagaacg cgttttcttt gttgaaaatg ataagaagga cctagagcct gcccccaaac 1140 cccttagtgg tgtgtttgac cgcttaacct ggtttcgtcg gaaactccat aacattgtgg 1200 gtactcattc cagtattagt ccaggtcaat tcttggattt ctatactggc aggaggcgta 1260 caatttatga aggtgccgtg aagtcattgg aggggttaag tgttcaaaga agggatgcct 1320 atttgaaaac gtttgttaag gcggagaaga ttaacaccac taggaagcct gacccagctc 1380 cgcgggtcat acaaccgagg aacgtaagat ataatgttga agttggtcgt tatctacgta 1440 ggtttgagca ttacctctat cgaagaattg atgaaatctg gaatggcccc actataatta 1500 aaggatacac tgtcgagcaa attgggaaaa ttgctcgtga tgcttgggac tctttcgtga 1560 gccccgtggc aatcgggttt gatatgaaga ggttcgacca acatgtatcc tccgacgctc 1620 ttaaatggga acacagtgtt taccttgatg ctttttgcca tgattcttat cttgcagaat 1680 tgttggagtg gcaattagtc aataaaggag tcgggtatgc cagtgatgga atgatcaaat 1740 ataaggttga tgggtgccgg atgagtggtg acatgaatac agctatgggt aactgtctga 1800 ttgcctgtgc tatcacacat gatttcttcc gtagtcctgg tatcagggcg cgtttgatga 1860 acaatggtga tgactgtgtc gtaatatgtg aaaaagaatg tgccgcggtg gttaaagccg 1920 acatggtaag gcactggaga caattcgggt ttcaatgcga gctcgagtgc gacgcagaag 1980 tcttcgagca aattgagttt tgtcaaatgc ggcctgtgta cgacggggaa aaatatgtga 2040 tggtgcggaa tccgctagtt agcctatcta aagattcata ctcagtcggc ccatggaatg 2100 gagtcaacca tgcacgcaag tgggtaaacg ctgtaggctt gtgtggctta tccctcactg 2160 gtggaattcc tgttgtccag agttactata atatgatgat tcgtaacact caatccgtga 2220 acagttctgg cattctccgg gatgtcagtt ttgctagtgg atttcgggag ttagcgcgat 2280 tgggtaacag gaaaaatggt gccatatcag aagacgcccg ttttagcttt tatctcgcat 2340 ttggcattac tccagattta caacgtgcca tggaaagtga ctatgatgct cataccatag 2400 agtggggttt cgtgccccag ggaaatccta gaatacagcc aatctcatgg actctcaacg 2460 aactgtagaa caaactaatc ctcggggaag aattaaagaa cgtggtgaca gcgggggaaa 2520 acagaagaac tcaatggggc gaaagatagc caatgatgct atctctgaat cgaagcaggg 2580 agttatgggt gctagcacat acattgctga caaaattaag gtgactatca actttaattt 2640 ttagtgtatg gcttgttacc gttgtgactc cagccccggg gattactctg gagctttgct 2700 tatattattt atctcatttg ttttcttcta cattacctcg cttagcccgc aaggaaatac 2760 ttacgttcac cacttcgata attcttccgt taaaacgcaa tacgttggca tctctacaaa 2820 tggcgatggt taaacgcatt aataatttac caacagtgaa gcttgctaag caggccctgc 2880 ccctgctaac gaatcctaaa cttgtgaata aggctataga tgtggttcct ttggtcgtcc 2940 aaggtggtca gaaattgtcc aaagctgcca agcggttgct tggcgcttat ggtggtaata 3000 tttcttacac tgagggcgcc aagcctggtg caatatccgc tccagttgcc attagtaggc 3060 gagtggcggg tatgaagcct aggtttgttc gatccgaagg atctgtgaag atagttcata 3120 gggagtttat tgcctctgtt cttccgtcga atgatctcac cgtgaataat ggtgatgtca 3180 atatcggtaa gtatagggtc aatcccagta ataacgcttt attcacatgg cttcagggac 3240 aagcgcaatt atatgatatg tacagattta ctcgactacg atttacctat attccaacca 3300 ccggatccac ttccacaggt cgtgtttcta ttctctggga tagagactcc caggatcccc 3360 tccctattga ccgcgccgct attagttctt atgctcatta cgctgattca gcgccttggg 3420 cagagaacgt cttagtggtt ccatgtgaca atacgtggag gtacatgaat gataccaatg 3480 cagtggaccg gaagttggtt gattttgggc agttcctttt tgctacttat tctggtgctg 3540 gtgccaccgc ccacggtgat ctctacgttg agtatgctgt tgaattcaaa gatccccagc 3600 ctattgctgg aatggtttgt atgtttgatc gcttggtctc tttctctgaa gtcggatcta 3660 caattaaagg agtcaattat attgctgatc gtgatgtgat aaccactggg ggcaatattg 3720 gtgttaacat caatattccc gggacttatc tcgtcacgat tgttcttaac gttacatcaa 3780 ttggctccct tactttcact ggtaattcta aactcgtagg caatagtctt aacgtcacca 3840 gcagtggcgc ttcagctctt acattcaccc ttaattccac tggtgtgccc aacagtacta 3900 attcttcatt ctctgtgggc accgttgttg cattgactag ggttcgtatg acgattactc 3960 gctgctctcc tgaaactgcc tacctcgcct agagatttaa ttcactatac tccaaaatcc 4020 ggtctccctt cttcctagct gttctc 4046 //