ID AB044291; SV 2; linear; genomic RNA; STD; VRL; 3992 BP. XX AC AB044291; XX DT 10-JAN-2002 (Rel. 70, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Melon necrotic spot virus genes for p29, p89, p7A, p7B, p14, p42 coat DE protein, complete cds, isolate:NH. XX KW . XX OS Melon necrotic spot virus OC Viruses; Riboviria; Tombusviridae; Procedovirinae; Gammacarmovirus. XX RN [1] RP 1-3992 RA Ohshima K.; RT ; RL Submitted (05-JUN-2000) to the INSDC. RL Kazusato Ohshima, Saga University, Faculty of Agriculture, Laboratory of RL Plant Virology; 1-banchi,Honjo-machi, Saga, Saga, 840-8502, Japan RL (E-mail:Ohshimak@cc.saga-u.ac.jp, Tel:0952-28-8730, Fax:0952-28-8709) XX RN [2] RA Ohshima K., Ando T., Motomura N., Matsuo K., Sako N.; RT "Nucleotide sequences of protein genes of two Japanese melon necrotic spot RT virus isolates"; RL Unpublished. XX DR MD5; dd89be848a29901941c69ac62152e92b. XX FH Key Location/Qualifiers FH FT source 1..3992 FT /organism="Melon necrotic spot virus" FT /isolate="NH" FT /mol_type="genomic RNA" FT /country="Japan" FT /db_xref="taxon:11987" FT CDS 93..2468 FT /codon_start=1 FT /transl_except=(pos:897..899,aa:OTHER) FT /product="p89" FT /note="The readthrough amino acid has not been identified" FT /note="readthrough product" FT /db_xref="GOA:Q8V996" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q8V996" FT /protein_id="BAB82507.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRAPGITNSIITYGEEVVEQVKVDIDE FT EAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVNXGCLEELAGFCTS FT VRRGTHPDMTEFPQDRPIKTRKLYCLGGVGTSVKFNVHNNSLANLRRGLIERVFFVEND FT KKELEPAPKPLSGVFDRLTWFRRKLHNIVGTHSSISPGKSLDFYTGRRRTIYEGAVKSL FT EGLSVQRRDAYLKTFVKAEKINTTKKPDPAPRVIQPRNVRYNVEVGRYLRRFEHYLYRG FT IDEIWNGPTIIKGYTVEQIGKIARDAWDSFVSPVAIGFDMKRVRPHVSSDALKWEHSVY FT LDALGHDSYLAELLEWQLVNKGVGYASDGMIKYKVDGCRMSGDMNTAMGNCLIACAITH FT DFFRSRGIRARLMNNGDDCVVICEKECAAVVKADMVRHWRQFGFQCELECDAEVFEQIE FT FCQMRPVYDGEKYVMVRNPLVSLSKDSYSVGPWNGVNHARKWVNAVGLCGLSLTGGIPV FT VQSYYNMMIRNTQSVNSSGILRDVSFASGFRELARLGNRKSGAISEDARFSFYLAFGIT FT PDLQRAMESDYDAHTIEWGFVPQGNPRIQPISWTLNEL" FT CDS 93..899 FT /codon_start=1 FT /product="p29" FT /db_xref="UniProtKB/TrEMBL:Q8V995" FT /protein_id="BAB82508.1" FT /translation="MDTGLKFLVSGGLATSSVIRKVSAVSSLDSSLPSSSILSAIHGSW FT TSAISHDCSKIAKVATVIGIGYLGVRIGAAWCRRAPGITNSIITYGEEVVEQVKVDIDE FT EAEEESDTGEEIVVGTIGIGIHTNVNPEVRAKRRHRSRPFIKKIVNLTKNHFGGCPDSS FT KSNVMAVSKFVYEQCKQHNCLPHQTRLIMSVAVPLVLSPDMYDISSKALLNSEILTENR FT ATLDRLKTLDGWLSHLVCHPLSTKAWRRAIDNLCGLPDWKAFKLVN" FT CDS 2447..2833 FT /codon_start=1 FT /transl_except=(pos:2642..2644,aa:OTHER) FT /product="p14" FT /note="The readthrough amino acid has not been identified" FT /note="readthrough product" FT /db_xref="GOA:Q8V994" FT /db_xref="InterPro:IPR007982" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8V994" FT /protein_id="BAB82509.1" FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNFXCMACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGN FT TYVHHFDNSSVKTQYVGISTNGDG" FT CDS 2447..2644 FT /codon_start=1 FT /product="p7A" FT /db_xref="GOA:Q8V993" FT /db_xref="InterPro:IPR007982" FT /db_xref="UniProtKB/TrEMBL:Q8V993" FT /protein_id="BAB82510.1" FT /translation="MDSQRTVEQTNPRGRSKERGDSGGKQKNSMGRKIANDAISESKQG FT VMGASTYIADKIKVTINFNF" FT CDS 2648..2833 FT /codon_start=1 FT /product="p7B" FT /db_xref="GOA:Q8UYH9" FT /db_xref="InterPro:IPR009575" FT /db_xref="UniProtKB/TrEMBL:Q8UYH9" FT /protein_id="BAB82511.1" FT /translation="MACYRCDSSPGDYSGALLILFISFVFFYITSLSPQGNTYVHHFDN FT SSVKTQYVGISTNGDG" FT CDS 2820..3992 FT /codon_start=1 FT /product="p42 coat protein" FT /db_xref="GOA:Q83427" FT /db_xref="InterPro:IPR000937" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q83427" FT /protein_id="BAB82512.1" FT /translation="MAMVKRINNLPTVKLAKQALPLLTNPKIVNKAIDVVPLVVQGGQK FT LSKAAKRLLGAYGGNISYTEGARPGAISAPVAISRRVAGMKPRFVRSEGSVKIVHREFI FT ASVLPSNDLTVNNGDVNIGKYRVNPSNNALFTWLQGQAQLYDMYRFTRLRFTYIPTTGS FT TSTGRVSILWDRDSQDPLPIDRAAISSYAHYADSTPWAENVLVVPCDNTWRYMNDTNAV FT DRKLVDFGQFLFATYSGAGATAHGDLYVEYAVEFKDPQPIAGMVCMFDRLVSFSEVGST FT IKGVNYIADRDVITTGGNISVNINIPGTYLVTIVLNATSIGSLTFTGNSKLVGNSLNVT FT SSGASALTFTLNSTGVPNSTNSSFSVGTVVALTRVRMTITRCSPETAYLA" XX SQ Sequence 3992 BP; 1025 A; 823 C; 989 G; 1155 T; 0 other; tttgttcttt ccacggatcc ccgacttctt cggttttgac agttagttag ttcgtatata 60 aggttatcca tcttaatcaa tacaggttag caatggatac tggtttgaaa tttcttgttt 120 ctggaggttt agccacctca tctgttatta ggaaagtgag tgctgtgagt tcattggatt 180 cgtcccttcc ttcatcgtct atactatctg ccattcatgg gtcttggact agtgctatca 240 gccacgattg tagcaagatt gccaaggttg ccaccgtgat tggaattggt tatcttgggg 300 ttcgaattgg tgccgcatgg tgtcgtcgtg cccccggaat aacgaattct ataattacat 360 acggggaaga agtggttgag caagtaaagg tggatattga tgaagaagct gaagaggagt 420 ccgatactgg tgaggaaatt gtggttggca cgataggtat tggtatacac actaacgtca 480 accctgaggt tcgagctaag cgcagacata gatcgaggcc attcattaag aagattgtga 540 atttaacgaa aaatcacttt ggtggatgcc ccgattcaag taaatcgaac gtcatggctg 600 ttagcaagtt tgtttatgaa caatgtaaac agcacaattg tcttccacat cagacgagat 660 tgatcatgag tgttgcagtt ccattggtgt taagtcccga catgtacgat atttccagta 720 aagctctgtt aaacagcgag atattgacag aaaacagagc tacactggac cgcctcaaaa 780 ctcttgacgg gtggctgtca catttagtgt gccaccccct tagcacgaag gcttggaggc 840 gggcgattga caacttatgt ggtcttcctg attggaaggc cttcaagttg gtcaactagg 900 ggtgcctaga ggaactcgct gggttctgta cttcggtacg gagggggacg cacccagaca 960 tgaccgagtt tcctcaggat cgtcccatta agacacgcaa actgtattgt ttggggggag 1020 ttggaactag cgtgaagttc aatgtacaca ataactctct agctaacctt cggcgcggtc 1080 ttatagaacg cgttttcttt gttgaaaatg ataagaagga actagagcct gcccctaaac 1140 cccttagtgg tgtgtttgac cgcttaacct ggtttcgtcg gaaactccat aacattgtgg 1200 gtactcattc cagtattagt ccaggtaaat ccttggattt ctatactggc aggaggcgta 1260 caatctatga gggtgccgtg aagtcattgg aggggttaag tgttcaaaga agggatgcct 1320 atttgaaaac gtttgttaag gcggagaaga ttaacaccac taagaagcct gacccagctc 1380 cgcgggtcat acaaccgagg aacgtaagat acaatgttga ggttggtcgt tatctacgta 1440 ggtttgagca ttacctctat cgaggaattg atgaaatctg gaatggcccc actataatta 1500 aaggatacac tgtcgagcaa attgggaaaa tcgctcgtga tgcttgggac tctttcgtga 1560 gccccgtggc aatcgggttt gatatgaaga gggtccgacc acatgtatcc tccgacgctc 1620 ttaaatggga acacagtgtt tatcttgatg ctttgggcca tgattcttat cttgcagaat 1680 tgttggagtg gcaattagtc aataaaggag tcgggtatgc cagtgacgga atgatcaaat 1740 ataaggttga tgggtgccgg atgagtggtg acatgaatac agctatgggt aactgtctga 1800 ttgcctgtgc tatcacacat gatttcttcc gtagtcgtgg tatcagggcg cgtttgatga 1860 acaatggtga tgactgtgtc gtaatatgtg aaaaagaatg tgccgcggtg gttaaagccg 1920 acatggtaag gcactggaga caattcgggt ttcaatgcga gctcgaatgc gacgcagaag 1980 tcttcgagca aattgagttt tgtcaaatgc gacctgtgta cgacggggaa aaatatgtga 2040 tggtgcggaa tccgctagtt agcctgtcta aagattcata ctcagtcggc ccatggaatg 2100 gagtcaacca tgcacgcaag tgggtaaatg ccgtaggctt gtgtggctta tccctcactg 2160 gtggaattcc tgttgtccag agttactata atatgatgat tcgtaacact caatccgtga 2220 acagttctgg cattctccgg gatgtcagtt ttgctagtgg atttcgggag ttagcgcgat 2280 tgggtaacag gaaaagtggt gccatatcag aagacgcccg ttttagcttt tatctcgcat 2340 ttggcattac tccagattta caacgtgcca tggaaagtga ctatgatgct cataccatag 2400 agtggggttt cgtgccccag ggaaatccta gaatacagcc aatctcatgg actctcaacg 2460 aactgtagaa caaactaatc ctcggggaag aagtaaagaa cgtggtgaca gcgggggaaa 2520 acagaagaac tcaatggggc gaaagatagc caatgatgct atctctgaat cgaagcaggg 2580 agttatgggt gctagcacat atattgctga taaaattaag gtgactatca actttaattt 2640 ttagtgtatg gcttgttacc gttgtgactc cagccccggg gattactctg gagctttgct 2700 tatattattt atctcatttg ttttcttcta tattacctcg cttagcccgc aaggaaatac 2760 ttacgttcac cacttcgata attcttccgt taaaacgcaa tacgttggca tctctacaaa 2820 tggcgatggt taaacgcatt aataatttac caacagtgaa gcttgctaag caggccttgc 2880 ccctgttaac gaatcctaaa attgtgaata aggctataga tgtggttcct ttggtcgtcc 2940 aaggtggtca gaaattgtcc aaagctgcca agcggctgct tggcgcttat ggtggtaata 3000 tttcttacac tgagggtgct agacctggtg caatatccgc tccagttgcc attagtaggc 3060 gagtggcggg tatgaagcct aggtttgttc gatccgaagg atcagtgaag atagttcata 3120 gggagttcat tgcctctgtt cttccgtcaa atgatctcac cgtgaacaat ggtgatgtca 3180 atatcggtaa gtatagggtc aatcccagta ataacgcttt attcacatgg cttcagggac 3240 aagcgcaatt atatgatatg tacagattta ctcgactacg atttacctat attccaacca 3300 ccggatccac ttctacaggt cgtgtttcta ttctttggga tagagactct caggatcccc 3360 tccctattga ccgcgccgct attagttctt atgctcatta cgctgattca acgccttggg 3420 cagagaacgt tttagtggtt ccgtgtgaca atacgtggag gtacatgaat gataccaacg 3480 cagtggaccg gaagttggtt gattttgggc agttcctctt tgctacctat tctggtgctg 3540 gtgccaccgc ccacggtgat ctctacgttg agtatgctgt ggaattcaaa gatccccagc 3600 ctattgctgg aatggtttgt atgtttgatc gcttggtctc tttctctgaa gtcggatcca 3660 caattaaagg agtcaattat attgctgatc gtgatgtgat aaccactggg ggcaatatta 3720 gtgtcaacat caatattccc gggacttatc tcgttacgat tgttcttaac gctacatcaa 3780 ttggctccct taccttcact ggtaattcta aactcgtagg caatagtctt aacgtcacca 3840 gcagtggcgc ttcagctctt acattcaccc ttaattccac tggtgtgccc aacagtacta 3900 attcttcatt ttccgtgggc accgttgttg cattgaccag ggttcgtatg acgattactc 3960 gctgctctcc tgaaaccgcc tacctcgcct ag 3992 //