Dbfetch
ID AB043679; SV 1; circular; genomic DNA; STD; PHG; 6891 BP. XX AC AB043679; XX DT 08-JUN-2000 (Rel. 64, Created) DT 27-JAN-2009 (Rel. 99, Last updated, Version 3) XX DE Vibrio phage VfO4K68 DNA, complete genome. XX KW . XX OS Vibrio phage VfO4K68 OC Viruses; Inoviridae; unclassified Inoviridae. XX RN [1] RP 1-6891 RA Taniguchi H., Chang B.; RT ; RL Submitted (24-MAY-2000) to the INSDC. RL Contact:Bin Chang University of Occupational and Environmental Health, RL School of Medicine, Department of Microbiology; Yahatanishi-Ku, Kitakyushu, RL Fukuoka 807-8555, Japan XX RN [2] RA Chang B., Miyamoto H., Taniguchi H., Yoshida S.; RT "Isolation and Genetic Characterization of a Novel Filamentous RT Bacteriophage, a Deleted Form of Phage f237, from a Pandemic Vibrio RT parahaemolyticus O4: K68 Strain"; RL Microbiol. Immunol. 46:565-569(2002). XX DR MD5; f98373160f304838506f9c35bdd403bd. XX FH Key Location/Qualifiers FH FT source 1..6891 FT /organism="Vibrio phage VfO4K68" FT /host="Vibrio parahaemolyticus O4:K68" FT /mol_type="genomic DNA" FT /note="synonym: Bacteriophage VfO4K68" FT /db_xref="taxon:127508" FT CDS join(6274..6891,1..591) FT /codon_start=1 FT /transl_table=11 FT /gene="vpf402" FT /product="Vpf402" FT /db_xref="GOA:Q9MBW3" FT /db_xref="InterPro:IPR003491" FT /db_xref="UniProtKB/TrEMBL:Q9MBW3" FT /protein_id="BAA96439.1" FT /translation="MSWCPSPTRPLNNVSTWGCLMTTATNILKSFDEQSVHIDYLCFTF FT AVKDLRHCHDAVRRLHKHEEYKGFAKSGLLQRHCRAPKFPAPPVFNPTVAQTSDEIDAY FT NKAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYTESMKLTSPDGEDFCGFVGI FT GGNNDTVHFQINGTGCKHVFARRPTWSLHDWLTNVLGVQTLARVDLAYDDYDGIFDCEY FT AYKAWRDDCFRTAERGRGPVLHEDMTIASIGKDGKPIYTKEQYSIGSRTSRIYWRIYNK FT ALEQKLANTGLVWYRSEVELKKWNVDVLLNPAGAYAALNDFAASISTAKKFNTKPVPTK FT RAALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTYGKLVTHI FT LET" FT CDS 595..954 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf119" FT /product="Vpf119" FT /db_xref="InterPro:IPR009712" FT /db_xref="UniProtKB/TrEMBL:Q9MBX6" FT /protein_id="BAA96432.1" FT /translation="MAKSVFVLGMDITWNSARGDSAQLNVSRPLREINSEKFKRRTIGE FT SGDVNPQWDQPLMIDHEYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPVDQ FT EIKKHFEASMKPVQG" FT CDS 958..1188 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf76" FT /product="Vpf76" FT /db_xref="GOA:Q9MBW6" FT /db_xref="UniProtKB/TrEMBL:Q9MBW6" FT /protein_id="BAA96433.1" FT /translation="MSVCVTVVNQYGNLKATKTPVADCQEYVLISAVDYQEYKEPVLFN FT GDLFLYVSGVLLINMVVGHWVGRVVRLMSKR" FT CDS 1194..1439 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf81" FT /product="Vpf81" FT /db_xref="GOA:Q9MBX5" FT /db_xref="UniProtKB/TrEMBL:Q9MBX5" FT /protein_id="BAA96434.1" FT /translation="MKKLELVVTNVKHAVVNKKTAAGAALMAASVSPAFAEVDITGAIN FT SAVSGGQANVSLVVAGLIGMAALGFGVTMVVGFLRR" FT CDS 1608..3122 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf504" FT /product="Vpf504" FT /db_xref="GOA:Q9MBW8" FT /db_xref="UniProtKB/TrEMBL:Q9MBW8" FT /protein_id="BAA96435.1" FT /translation="MNKSLFLLLFSCLFLSLNASAAQPTYKVSDVSAYPDCKLLLGLRV FT NPASYVSCYENKFVNYKDFSTKSCYLRHGKYVVDIMCHTTSPSWPLYRAAGFLQNSAQC FT PPDYEKVEDEYVVSCEPIVPACEYGENPDGSCMDACQFKQSIGDTVKLYWHPAIYGELV FT TGACYGDYGATRCEVTKNESTIICTGVPDGQYTPDSQCSLRFAYTGRQCDGGTLFWGVN FT GPDEPIIPPDTPEDPTHDPDDPTDEIEDPTVLPDDSTNTVNPGVVDDKPDVEDPDTDES FT TDTAVLSAIKGLNVDVNKGIHDLNVDINQSHADITNAVIDVKGSLVDNTQAIQEQQIND FT NKIYNNTKALIQQANGDITTAVNNNTNATIGIRDDLKGLGDSVGELDSSLNAIEGLLTG FT SEFGTPTGTAITGEIFTAEDFANLQTTIDEKAESIQGYVDDIKGLITIGTNFNNGTLSD FT KSFNIKGATVESGLQRFDAVSGYVRPVVLFICALIALWVLFGNRSK" FT CDS 3124..3468 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf114" FT /product="Vpf114" FT /db_xref="InterPro:IPR019670" FT /db_xref="UniProtKB/TrEMBL:Q9MBV3" FT /protein_id="BAA96436.1" FT /translation="MEYIYSALEFIANIGQTFLDFFDVAIEWIKNAFEYGAMWLISVWL FT DIKIASIQIALKIAQLLLEEYGVYTLVEDRFNALPSDVRYILTEYGVTSGLRVIFDAFA FT TSLVMRFFNW" FT CDS 3473..4858 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf461" FT /product="Vpf461" FT /db_xref="GOA:Q9MBV9" FT /db_xref="InterPro:IPR008900" FT /db_xref="UniProtKB/TrEMBL:Q9MBV9" FT /protein_id="BAA96437.1" FT /translation="MATSFRYGHGGSYKSACAVWFDLLPALREGRICITNIHGMQPLEV FT IEQRLGEKFPDTARLIRISSRNPEGFELWKYFFCWAPIGAFILIDECQQIFSVNAGFKM FT ANIHKRPFTDFEPHLPEGFSELFHSRWLTIDTSSLDNGEIDDCQRTRFDEQGRIIYPEN FT FNNAFMEHRHYNWDIVLLTPDFAQIPKELKGVAELAKQHKGKDGIFFSNRKPRILEHDP FT TRTVTKPSKDDVVYNLKVPLDVHLLYASTVTGQITKSGLGKNIFLNPKFLAAMALVVLS FT FGYLVYALIGMVSDSETTTAEGTQLHQTSQQSGVSTSQGQARPGQSGSPGSVMGSSGSG FT CTGSGCGNESYHDVGTVPAWFPLANSESIYVSAVERWHKATSIHVNVHFEVVTPRGVTY FT LDDGFLNKLGVKMEYLDDCLVQLSHGASNFYVTCSPYEQYAQRQEQDIELKPVGGLFSG FT DET" FT CDS 5528..6175 FT /codon_start=1 FT /transl_table=11 FT /gene="vpf215" FT /product="Vpf215" FT /db_xref="UniProtKB/TrEMBL:Q9MCC2" FT /protein_id="BAA96438.1" FT /translation="MKGLDMKYVFRGKSYTTLTSCYRDNTDQVTVGIGTVRTRLKNGWS FT LNKALLHPKQKTIKTKLGSHTVEGKVYENLPSIAEEYGMTLNTIYKRYSRGCRGDDLVP FT LKKRKSYVAPDDEANFRFYANGVGYKSAADACRKLNVKYGTYRLHMSNGFTVEQALGIE FT KVQDGRKVRGTKFNVDGKEYTINELSILHKVVRNWSRRFHERSSNHLLRLAT" XX SQ Sequence 6891 BP; 1779 A; 1599 C; 1656 G; 1857 T; 0 other; gttgacttgg cctatgacga ttacgacgga atttttgatt gtgaatacgc ttacaaggcg 60 tggcgtgacg actgtttccg caccgccgaa cgtggtcgtg gccctgtgct tcatgaagat 120 atgaccattg ccagtatcgg caaagacggc aaaccgattt acaccaaaga gcaatactcg 180 attggttcgc gtacctcgcg catttactgg cgtatctaca acaaggctct tgagcagaaa 240 ctcgcaaaca cgggtcttgt ctggtatcgc tctgaagtcg agctgaaaaa atggaatgtt 300 gatgtgttgc tgaatccagc tggcgcgtat gccgcgctca atgatttcgc agcctcgatt 360 tctaccgcta agaaattcaa taccaaacct gtcccgacga aacgcgcagc gttagacctg 420 ctggcctctg cgcattggat gcgtcgtcag tacgggaaaa tccttaattc acttatcgaa 480 ttccatgagg gcgacattga aaccgtggtc ggttcccttg tccgtgatgg aacgaaattc 540 accttccccg atacctacgg caagttggtg actcacatat tggagactta acaaatggct 600 aaatccgttt ttgtacttgg catggatatc acttggaact cagcacgtgg cgacagtgct 660 caactgaacg tgtcacgtcc tctacgtgaa atcaactcag agaaattcaa acgccgcact 720 atcggtgaat cgggtgatgt gaatccccaa tgggatcaac ctttaatgat tgaccatgaa 780 tatgccctgc ttcttgagcg cactggtgct ctcgttcctc gccgcgaata ccaattgcgc 840 ttggagatta acccagaaga cccattggca ggcgctatcg tgactgagct tattccagtc 900 gaccaagaaa ttaagaagca cttcgaagct tcaatgaaac ccgttcaagg ctaaaaaatg 960 tctgtatgcg tcaccgtcgt taaccagtat ggcaatttga aagcaacgaa aacgcctgtt 1020 gcggattgcc aagaatacgt gctgatttcg gcggtggact accaagaata taaggaacca 1080 gtcctcttca acggtgactt gttcctgtat gtcagtggcg tgctcttgat caacatggtc 1140 gttggtcact gggtgggtcg tgttgttcgc cttatgagta aaaggtaaat cttatgaaaa 1200 aactagaact tgttgtaact aacgtaaaac acgcagtcgt aaacaaaaag accgcagctg 1260 gtgctgcact gatggccgcg tctgtctctc cggcgttcgc tgaagtcgat atcacgggcg 1320 caatcaactc tgcggtatcc ggtggtcaag ctaacgtatc actggttgtg gcgggtctga 1380 ttggtatggc tgcactgggc tttggtgtga ccatggttgt tggcttctta cgccgctaac 1440 ggctcacctc tatgcctcct ttatcgggta atttacttgg agatgttctc gctatcgttc 1500 taggtgttgc ctttgcgggg gcattcctcc acggctttgt gagtggcatc aatactcact 1560 aatcaacgga taagggagct tcggctccct tttttaatgg tgcaaatgtg aataagtcac 1620 tctttttact tttgttttcg tgcttgttct tatcacttaa tgcaagcgcg gctcaaccaa 1680 cctataaggt ttcagacgtt tcagcttatc ccgattgtaa gttgctattg ggtctgagag 1740 ttaaccctgc ctcttatgtc tcttgttatg agaataaatt tgttaactac aaggattttt 1800 ctactaagtc ctgttatttg aggcatggca aatacgttgt agatatcatg tgtcacacga 1860 ccagtccttc ttggcctctt tatcgtgctg ctggattctt gcaaaattcg gctcaatgtc 1920 cgcctgacta tgaaaaggta gaagacgagt acgtcgtgtc gtgtgaaccc atcgttcctg 1980 cttgtgagta tggagagaat cctgatggct catgcatgga tgcttgtcag ttcaaacagt 2040 ccattggcga tacggtgaaa ttgtactggc accctgccat atacggcgaa ttggtgacgg 2100 gcgcgtgcta cggtgactat ggtgccactc gatgtgaagt gactaagaac gaatccacca 2160 ttatttgcac tggcgttcct gatggacagt acacgcccga ctctcaatgc tctctgcgct 2220 ttgcttacac tggacgtcag tgtgacggtg gcacactttt ctggggcgtg aatgggccag 2280 atgaacccat cattccaccg gatacgccag aagacccaac ccatgaccca gatgacccaa 2340 ccgatgagat tgaagaccca actgtcctac ccgacgattc aaccaacacg gttaatcccg 2400 gtgtcgttga tgataaaccg gatgtagaag accctgacac ggatgaatcg acagacacgg 2460 cagtcctttc tgctattaaa gggcttaacg tggatgtgaa caaaggcatt catgatctta 2520 acgtcgatat caaccagtca cacgcggaca tcaccaacgc ggtgattgat gtgaaaggct 2580 ctttggtcga taacacccaa gccattcaag agcagcaaat caatgacaac aagatttata 2640 acaacaccaa ggcactcatc caacaggcca acggcgatat cactacggcg gtgaacaaca 2700 ataccaacgc cactattggc attcgtgacg atttaaaagg gcttggtgat tccgtgggcg 2760 aactcgatag cagcttaaat gcgattgagg gtctattgac tggctcagag tttggcacac 2820 ctacgggtac cgctatcact ggcgaaatct tcacggcaga agactttgcc aacctgcaaa 2880 ccacgataga tgaaaaagcc gaatccattc aaggctatgt ggatgatatc aaaggcttaa 2940 tcactatcgg caccaacttc aataacggca cattgagtga caagtctttc aatatcaaag 3000 gcgcaaccgt tgaatcagga ctacagcgtt ttgatgcggt atcgggctac gtgcgccctg 3060 tcgtgctgtt catttgtgcc ttaatcgccc tttgggttct gtttggtaat cggagtaaat 3120 aacatggaat acatctactc agcattagag tttattgcca acattgggca aacctttctc 3180 gacttctttg atgtggcgat tgaatggata aagaacgcgt ttgaatacgg cgcgatgtgg 3240 cttatctcag tttggctcga tatcaagatt gcctcgatac aaatcgcact caagattgcg 3300 cagctgctgc tcgaagaata tggcgtctat acgcttgtcg aagaccgctt taatgcgctt 3360 ccctctgacg tccgttatat cttgaccgaa tacggcgtca cctctgggct acgtgtcatc 3420 tttgatgcgt tcgctacgtc tttagttatg cgtttcttta actggtgatt gaatggctac 3480 ttcatttcga tacggtcacg gtggctctta caaatcggct tgcgccgtgt ggtttgactt 3540 actgcctgca ctgcgtgaag gtcgaatttg cattacgaat attcatggca tgcagccact 3600 tgaagtgatt gaacaacgcc ttggtgaaaa gtttcctgat acggctcggc tcattcgcat 3660 tagctctcgc aaccctgaag gcttcgagct ttggaaatac ttcttctgtt gggctcctat 3720 tggcgcgttc atcctcattg atgagtgtca gcaaatcttc tcggtcaatg caggtttcaa 3780 aatggcgaac atacacaagc gccctttcac tgactttgag cctcacttgc cggaaggatt 3840 ctctgagctg tttcactctc gctggctaac gattgatacg tccagtttgg acaatggcga 3900 gatagacgat tgccaacgta cacgttttga tgagcaagga cgcatcatct atccggagaa 3960 ctttaacaac gcctttatgg agcaccggca ctacaactgg gacattgtgt tactcacacc 4020 tgactttgct caaatcccga aagagttaaa aggtgtcgcg gagttggcca agcaacataa 4080 gggtaaagat gggatcttct tttccaaccg caaaccgcgc atcttggaac atgacccaac 4140 tcgaacggtc accaaaccaa gcaaagacga tgtggtttat aacctcaagg tgccgcttga 4200 cgtccacctc ctctacgcct cgactgtcac ggggcaaatc accaagtcgg ggcttggaaa 4260 gaacatcttt cttaacccga aattcttagc agctatggca ctggtcgtgc tttcatttgg 4320 gtacttagtt tatgcgctta ttggtatggt ttctgattct gagacgacaa ctgcggaagg 4380 aacgcagctt catcaaactt cgcagcaaag tggcgtttcg acttcgcaag gtcaagcacg 4440 tcctggtcaa agtggttcgc ctggttctgt catgggttct agtggttctg gctgtacggg 4500 ttctggttgc gggaatgagt cttatcatga cgtaggcacc gttccggctt ggttcccact 4560 ggcgaactca gaaagtatct atgtctctgc ggtggaacgt tggcacaaag ccacctcgat 4620 acacgtcaac gtgcattttg aggttgtcac accgcgcggt gtgacttacc tcgatgacgg 4680 attcctaaac aagttgggcg tcaagatgga atatctggac gattgtctcg tccagttgtc 4740 ccacggcgca tccaacttct atgtcacgtg ttcgccgtat gagcaatatg cacaacggca 4800 agagcaagat attgaactca aacccgttgg cggtttgttt agtggagacg aaacctaatg 4860 aatgaatacg taacgcatgg acagctggtt gaaatcatcg agctgtttga tcatctctcg 4920 atagtgaacg ccgtcattgt ggtactcgcg tatgaccttg cgagatacct cctaggcaaa 4980 ctggtcgact acttcaatta aaggcacggt gccagccccg cagggataag gagttgcgga 5040 gcgacgacga ggcaccaagc cgcccacctt agcaaaacct agcttcatta cttaatcggc 5100 gcggttagca gcccaaagcc acttggatgc tgccgccctc cttcctgcta gaccagcctt 5160 gcagagacta tccacaccaa aggcgcgtta acctactgga acgctgcata ctcactacat 5220 caaagctttg cgagtgtcga gcaatgctta ttcttctttt ctgggttatc tccgacggac 5280 gcgcggagca agtgaggacg ggctaggacg attgcgcgac gtgcggcggg aggttaaacc 5340 cccgaatctg tattacgggg gtaaattcca ctgtagtcca acagtccgcg tagtcataaa 5400 tagaattaaa ccaaggaagc atttttacat atgtatttta gacatgcagc atcactcaag 5460 atataggaag atggtatcct ataaatagat tattaggttt acttaaatct taacaacatg 5520 ttgggctatg aagggattag atatgaaata cgtctttaga gggaaaagtt atacgacatt 5580 gacatcatgt taccgagaca atacagatca agtaactgtt ggtataggaa ctgtaagaac 5640 acgattgaaa aacggttgga gtttaaataa agctctgttg caccctaaac aaaaaacaat 5700 aaaaacaaag ttaggttcgc atacagttga ggggaaagta tacgaaaatt tgccaagtat 5760 tgctgaagag tacggcatga ctttaaatac aatttataag cgatattcta gaggctgtcg 5820 tggggatgat cttgtacctc taaaaaagag aaagtcttat gtggctcctg atgatgaagc 5880 taatttccgc ttttatgcta acggagttgg atataaaagt gctgcagatg catgcagaaa 5940 gctgaatgta aaatatggaa cttataggct tcacatgtcc aatggtttta cagtcgaaca 6000 agctttaggt atcgagaagg tacaagacgg aagaaaggtt agaggaacca agtttaatgt 6060 cgatggaaag gagtacacga taaatgagct gtctatctta cataaggtcg ttcggaactg 6120 gtcaaggcga tttcatgaac gaagctcaaa tcatctatta cgacttgcta cctgactaca 6180 cggtttctgt gttggtcaaa ggttgcgacg aatgggattt gcttaaatcc atgtctcatc 6240 ttgagtcttg ggcttcctct cagttcactt cttatgagtt ggtgtccatc accaacacga 6300 ccgttgaaca acgtatcaac ttgggggtgt ttgatgacta ctgcaactaa catccttaaa 6360 agtttcgatg agcaaagcgt tcatattgat tacctgtgtt ttacgtttgc tgtgaaagac 6420 ttacgtcatt gtcatgatgc ggttcgtcga ttgcacaagc atgaggaata caaaggcttt 6480 gccaaatctg gactgttaca gcgtcactgt cgtgcgccta agttccctgc tccacctgtg 6540 tttaatccga cggtcgctca gacttccgac gagattgatg catacaacaa agcgtttgat 6600 atctgttatc gcaattactt ggaagactgc ttgcgcatct tcaccaacca agtgcttggt 6660 ttgtcgctgt cagcacctcg cggtttgggt ttccagttct acaccgaatc catgaaactg 6720 acttcgccag atggtgagga cttctgcggc ttcgttggta tcggcggtaa caatgacacg 6780 gtgcatttcc aaatcaacgg aacgggatgc aagcatgtat ttgcccgtcg tcctacgtgg 6840 tcgctgcatg actggctgac caatgtactt ggtgtgcaaa ctttggcgcg t 6891 //