ID AB042650; SV 1; linear; genomic RNA; STD; VRL; 3558 BP. XX AC AB042650; XX DT 11-JAN-2001 (Rel. 66, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Watermelon silver mottle virus nss, np genes for non-structural S, DE nucleocapsid protein, complete cds, isolate: WS-Y. XX KW . XX OS Orthotospovirus citrullomaculosi OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3558 RA Okuda M.; RT ; RL Submitted (15-MAY-2000) to the INSDC. RL Contact:Mitsuru Okuda Kyushu National Agricultural Experiment Station, RL Plant gene control; 2421, Suya, Nishigoshi-machi, Kikuchi-gun, Kumamoto RL 861-1192, Japan URL :http://ss.knaes.affrc.go.jp/ XX RN [2] RX DOI; 10.1007/s007050170183. RX PUBMED; 11315646. RA Okuda M., Taba S., Tsuda S., Hidaka S., Kameya-Iwaki M., Hanada K.; RT "Comparison of the S RNA segments among Japanese isolates and Taiwanese RT isolates of Watermelon silver mottle virus"; RL Arch. Virol. 146(2):389-394(2001). XX DR MD5; 38aee3b966d76fb78cf341f639a9b930. XX FH Key Location/Qualifiers FH FT source 1..3558 FT /organism="Orthotospovirus citrullomaculosi" FT /host="Citrullus lanatus" FT /lab_host="Tetragonia expansa" FT /isolate="WS-Y" FT /mol_type="genomic RNA" FT /country="Japan" FT /note="synonym: watermelon spotted wilt virus" FT /db_xref="taxon:3052571" FT 5'UTR 1..65 FT CDS 68..1387 FT /codon_start=1 FT /transl_table=1 FT /gene="nss" FT /product="non-structural S" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q9DU49" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="BAB20587.1" FT /translation="MSTAKNAASEFIKSYGTRDNKAVNDCYSVFTGEGVNFLNLFMHNN FT AGIKSAFSINDLGRNEDVKIHEAEVVDSCHDYHYFEKFGLDITFCEHEMNLVVRKPGVK FT NTGCKFTMHNQIFNPNSNILNMTPGTISEDAFYDRSKIASSGLLPSGWCLDECYKNNFY FT IATNGDLTLDYGFSVMGKTTSYWRESMSREKILSVKQKCFSDNTVPTNRLLSTSTVKGI FT QLGSELAFDTTVILSCKQNLNIDLKSQYRVSFHGIQEEGAFARTFCVPFENKSRMISFY FT AKTVADNSNERTTLIIKVVTKTVDSHLVIPIRNHINCEKKIGARVGLVDFCDSDPNYNQ FT LIVKNLLSVHTQFAINLSEVIQKPVIVFKMYDKELHNDYTEVSGRILNYQIDSEGNIYF FT LSKTLEVLPKSLSTLSYLGSIAPVQWKECLEHQHFVVKAE" FT CDS complement(2666..3493) FT /codon_start=1 FT /transl_table=1 FT /gene="np" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q9DU48" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q9DU48" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="BAB20588.1" FT /translation="MSNVKQLTEKKIKELLAGGTADVEIETEDSTPGFSFKAFFDNNKN FT IEITFTNCLNILKCRKQIFAACKSGKYNFCGKNIVATSVDVGPEDWTFKRTEAFIRTKI FT VSMVEKSKNEAARQEMYGKIMELPLVAAYGLNVPSSYDSCALRMMLCIGGPLPLLSSIR FT GLAPIIFPLAYYQNIKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKDDLDVMFKQAVKI FT LSESNPGTASSISLKKYEDQVKYMDRIFSANLSVDDYGDHSKKSSKPSTSLEV" FT 3'UTR 3494..3558 XX SQ Sequence 3558 BP; 1201 A; 589 C; 574 G; 1194 T; 0 other; agagcaatcg aggcaaataa taattctaga aaaaacaacg ttatactcaa gtaatactat 60 ttcaggcatg tctactgcaa agaatgctgc ttcggaattc atcaaaagtt atggcacaag 120 agacaacaaa gcagtcaatg attgctactc tgtattcact ggagaaggtg tcaactttct 180 caatttgttc atgcataata atgcaggtat taaatctgca ttcagcatca acgatctggg 240 caggaatgaa gatgtcaaaa tccatgaagc tgaagttgtt gattcatgcc atgattatca 300 ttattttgaa aaatttggac tagacataac attctgcgag cacgaaatga atttagttgt 360 gaggaaacca ggtgtgaaga acacaggctg caagttcaca atgcacaatc aaatctttaa 420 tccaaattct aatatactga acatgacgcc cggaacaatt tcagaagatg ctttctatga 480 cagaagcaaa atagcatcta gtggactact tccttcaggg tggtgtttgg atgaatgcta 540 taagaataat ttctatatag ctaccaatgg agatcttacc cttgattatg ggttctctgt 600 aatgggaaaa acaacatctt actggagaga gagcatgtca agggaaaaga tcttgtcagt 660 taagcaaaaa tgcttttctg acaacactgt ccctaccaac agattgctct ctacatcaac 720 agtcaaaggc atccaacttg gttctgaact agcttttgat actacggtta tactatcatg 780 caagcaaaat ttaaacattg atttgaaatc ccaatatcgt gtttcatttc atggtattca 840 ggaagaaggg gctttcgcaa ggactttctg cgtccctttt gaaaataaat ctagaatgat 900 cagtttttac gcaaaaactg ttgctgacaa cagtaatgag aggaccaccc ttatcataaa 960 agtggttaca aaaactgttg attcccatct tgtcattcct ataagaaatc atatcaattg 1020 tgaaaagaaa attggagcaa gagtaggtct cgttgatttc tgtgatagtg atcccaatta 1080 caatcaattg attgttaaga atctgttgag tgtccatact cagtttgcta tcaatttatc 1140 tgaagttatt caaaagccag tcatagtgtt caaaatgtac gataaagagc tccacaatga 1200 ttatacagaa gtttccggga gaatcctgaa ttaccagata gattcagaag ggaatattta 1260 tttcctctca aagactcttg aggtcctgcc taaatcacta tcgaccctga gttatttagg 1320 cagcattgca ccagttcaat ggaaagagtg tttggaacat cagcactttg ttgtgaaagc 1380 agaataaact tgtttgaaac tcttatgcta tattagtatc tataaatagt atatcgtatg 1440 ttgtatgtct gcatttgtgc atttcaatta ataaattaat tttagtcata gatccaagta 1500 tttgtgtgct taggtatttt atttaagttt aaatttagta aagtaagctt atttgctaga 1560 attgaataaa taaatagata ataaatatat aagtaaatga agctaaaaac caaaaatcca 1620 taatcaagaa taaatccata aaattaagta aataaagtta gtcatgaatc tgaatgcttg 1680 tgtgtctgag tgtttaattt aggttcaagt ttagtagtat aagttagttt gtgtcgatta 1740 agtaaataaa cacataaata ggtgaaatta tcaaatcaaa agtctacaaa attaaataaa 1800 aactcataaa caaaaaaccc ataaaaatga aataacaaaa aaccaaaaag acctcgaaag 1860 gggcacattt ggctttatta ccctgagcaa tttctaattt acctgtaaga ataatgggat 1920 tatttggatc atgtgccttt gtttatgatc ataatgaaca agagtttgct tgaaattaat 1980 catagttgga atcttttagg tcatctgtgt aagttgtaat gaaggagcat tattgttagt 2040 tagtttattc tgatcacatg attaatacaa aaattctaac atgctatgac cagttgatca 2100 tgatattaga attcatgtaa attatatatt ctgattgatt cgagcagctt tagatctgta 2160 atctaactct aagattcttt atcagtattg acccttttat ctaactattt gtgtgttcaa 2220 cctaatcaat ctaaatcatt taaaaacttc caatctcaat aaattataaa gctaagtttg 2280 atcttatgat tgatcattac agttaaataa atcatattta cagaaaattg gccattggtt 2340 tgcctccgaa gaggtctttt ttgtttttat tttttttgat ttttttgggt tttttggatt 2400 tttttatata tatatatata tattgtttat ttatttgatt tatttatttt attgttttta 2460 tttattttat tcatttattt tatatctata taaacacaca catagttata actttataat 2520 agctacttgt ataattaaaa taagtatata gttatataag cacacacaaa aaacttaaac 2580 aaacataaat agatttattg aattatatag tcaagcataa acataaacac atatgtgcac 2640 tatatgcacg gttgacactt caaagttaca cttccaagga agtgctgggc tttgaacttt 2700 tctttgaatg atcaccataa tcatccacag aaaggttagc actgaagatc ctgtccatgt 2760 acttaacttg atcctcatat ttcttgagcg aaatagagct agctgtacca gggttactct 2820 cactgagtat tttgacagcc tgtttgaaca taacatccaa atcatcctta aattcaacct 2880 gtgaagcaga aagaacctta gccactttac aaacttgctc ataggtggag aagttcttta 2940 tacctaactt ttctttcttt atattttggt aataagctaa agggaaaata atcggtgcca 3000 gtccccttat actagataaa agaggtagag gtcctccaat acataacatc atcctcaagg 3060 cacaagaatc ataagatgaa ggcacattca acccataagc agcaactaat ggtagttcca 3120 tgattttccc atacatttcc tgtctagcag cttcattctt gcttttctcc accatactaa 3180 ctatttttgt cctgataaaa gcttctgtcc tcttgaatgt ccagtcctca ggtccaacat 3240 caacacttgt agcaacaata tttttcccgc aaaaattata cttaccactc ttgcaggctg 3300 caaaaatctg tttcctgcat tttaggatat tcaagcagtt tgtaaaagtt atctctatat 3360 ttttgttgtt gtcaaaaaaa gctttgaagc taaatccagg agtggagtct tctgtttcaa 3420 tttcaacatc tgctgtacca ccagccaaaa gttccttgat tttcttttct gtaagctgct 3480 taacgttaga catggtgttt acaaaggaaa cgtctgatat gttgtttgaa ctgattttat 3540 tagcgcctcg attgctct 3558 //