ID AB042649; SV 1; linear; genomic RNA; STD; VRL; 3553 BP. XX AC AB042649; XX DT 11-JAN-2001 (Rel. 66, Created) DT 13-DEC-2008 (Rel. 98, Last updated, Version 6) XX DE Watermelon silver mottle virus nss, np genes for non-structural, DE nucleocapsid protein, complete cds, isolate: WS-O. XX KW . XX OS Orthotospovirus citrullomaculosi OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-3553 RA Okuda M.; RT ; RL Submitted (15-MAY-2000) to the INSDC. RL Contact:Mitsuru Okuda Kyushu National Agricultural Experiment Station, RL Plant gene control; 2421, Suya, Nishigoshi-machi, Kikuchi-gun, Kumamoto RL 861-1192, Japan URL :http://ss.knaes.affrc.go.jp/ XX RN [2] RX DOI; 10.1007/s007050170183. RX PUBMED; 11315646. RA Okuda M., Taba S., Tsuda S., Hidaka S., Kameya-Iwaki M., Hanada K.; RT "Comparison of the S RNA segments among Japanese isolates and Taiwanese RT isolates of Watermelon silver mottle virus"; RL Arch. Virol. 146(2):389-394(2001). XX DR MD5; e21e05f613ab3c59bdc817bbac4644a9. XX FH Key Location/Qualifiers FH FT source 1..3553 FT /organism="Orthotospovirus citrullomaculosi" FT /host="Citrullus lanatus" FT /lab_host="Tetragonia expansa" FT /isolate="WS-O" FT /mol_type="genomic RNA" FT /country="Japan" FT /note="synonym: watermelon spotted wilt virus" FT /db_xref="taxon:3052571" FT 5'UTR 1..67 FT CDS 68..1387 FT /codon_start=1 FT /transl_table=1 FT /gene="nss" FT /product="non-structural" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:Q9DU51" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="BAB20585.1" FT /translation="MSTAKNAASEFIKSYGTRDNRAVNDCYSVFTGEGVNFLNLFTHNN FT AGIKSAFSINDLGRNEDVKIHEAEVVDSCHDYHYFEKFGLDITFCEHGMNLVVRKPGVK FT NTGCKFTMHNQIFNPNSNILNMTPGTISEDAFYDRSKIASSGLLPSGWCLDECYKNNFY FT IATNGDLTLDYGFSVMGKTTSYWRESMSREKILSVKQKCFSDNTVPTNRLLSTSTVKGI FT QLGSELAFDTTVILSCKQNLNIDLKSQYRVSFHGIQEEGAFARAFCVPFENKSRMISFY FT AKTVADNSNERTTLIIKVVTKTVDSHLVIPIRNHINCEKKIGARVGLVDFCDSDLNYNQ FT LIVKNLLNVHTQFAINLSEVIQKPVIVFKMYDKELHNDYTEVSGRILNYQIDSEGNIYF FT LSKTLEVLPKSLSTLSYLGSIAPVQWKECLEHQHFVVKAE" FT CDS complement(2661..3488) FT /codon_start=1 FT /transl_table=1 FT /gene="np" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q9DU50" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q9DU50" FT /inference="non-experimental evidence, no additional FT details recorded" FT /protein_id="BAB20586.1" FT /translation="MSNVKQLTEKKIKELLAGGTADVEIETEDSTPGFSFKAFFDNNKN FT IEITFTNCLNILKCRKQIFAACKSGKYNFCGKNIVATSIDVGPEDWTFKRTEAFIRTKI FT VSMVEKSKNEAARQEMYGKIMELPLVAAYGLNVPASYDSCALRMMLCIGGPLPLLSSIR FT GLAPIIFPLTYYQNIKKEKLGIKNFSTYEQVCKVAKVLSASQVEFKDDLDVMFKQAVKI FT LSESNPGTASSISLKKYEDQVKYMDRIFSANLSVDDYGDHSKKSSKPSTSLEV" FT 3'UTR 3489..3553 XX SQ Sequence 3553 BP; 1202 A; 586 C; 573 G; 1192 T; 0 other; agagcaatcg aggcaaataa taattctaga aaaaacaacg ttatactcaa gtaatactat 60 ttcaggcatg tctactgcaa agaatgctgc ttcggaattc atcaaaagtt atggcacaag 120 agacaacaga gcagtcaatg attgctactc tgtattcact ggagaaggtg tcaactttct 180 caatttgttc acgcataata atgcaggtat taaatctgca ttcagcatca acgatctggg 240 caggaatgaa gatgtcaaaa tccatgaggc tgaagttgtt gattcatgcc atgattatca 300 ttattttgaa aaatttggac tagacataac attctgcgag cacggaatga atttagttgt 360 gaggaaacca ggtgtgaaga acacaggctg caagttcaca atgcacaatc aaatctttaa 420 tccaaattcc aatatactga acatgacgcc cggaacaatt tcagaagatg ctttctatga 480 cagaagcaaa atagcatcta gtggactact tccttcaggg tggtgtttag atgaatgcta 540 taagaataat ttctatatag ctaccaatgg agatcttacc cttgattatg ggttctctgt 600 aatgggaaaa acaacatctt actggagaga gagcatgtca agggaaaaga tcttgtcagt 660 taagcaaaaa tgcttttctg acaacactgt ccctaccaac agattgctct ctacatcaac 720 agtcaaaggc atccaacttg gttctgaact agcttttgat actacggtta tattatcatg 780 caagcaaaat ttaaacattg atttgaaatc ccaatatcgt gtttcatttc atggtattca 840 agaagaaggg gctttcgcaa gggctttctg cgtccctttt gaaaataaat ctagaatgat 900 cagtttttac gcaaaaactg ttgctgacaa cagtaatgag aggaccaccc ttatcataaa 960 agtggttaca aaaactgttg attcccatct tgtcattcct ataagaaatc atatcaattg 1020 tgaaaagaaa attggagcaa gagtaggtct cgttgatttc tgtgatagtg atctcaatta 1080 caatcaattg attgttaaga atctgttgaa tgtccatact cagtttgcta tcaatttatc 1140 tgaagttatt caaaagccag tcatagtgtt caaaatgtac gataaagagc tccacaatga 1200 ttatacagaa gtttccggga gaatcctgaa ttaccagata gattcagaag ggaatattta 1260 tttcctctca aaaactcttg aggttctgcc taaatcacta tcgaccctga gttatttagg 1320 cagcattgca ccagttcaat ggaaagagtg tttggaacat cagcactttg ttgtgaaagc 1380 agaataaact tgtttgaaac tcttatgcta tattagtatc tataaatagt atatcgtatg 1440 ttgtatgtct gcatttgtgc atttcaatta ataaattaat tttagtcata aatccaagta 1500 tttgtgtgct tagatatttt atttaagttt aaatttagta gagtaagctt atttgctaga 1560 attgaataaa taaatagata ataaatatat aagtaaatga agctaaaacc aaaaatccat 1620 aatcaagaat aaatccataa aattaagtaa ataaagttag tcatgaatct gaatgcttgt 1680 gtgtctgagt gtttaattta ggttcaagtt tagtagtata agttagtttg tgtcgattaa 1740 gtaaataaac atataaatag gtgaaattat caaatcaaaa gtttacaaaa ttaaataaaa 1800 actcataaac aaaaaaccca taaaaatgaa ataacaaaaa aaccaaaaag acctcgaaag 1860 gggcacattt ggctttatta ccctgagcaa tttctaattt acctgtaaga ataatgggat 1920 tatttggatc atgtgccttt gtttatgatc ataatgaaca agagtttgct tgaaattaat 1980 catagttggg atcttttagg tcatttgtgt aagctgtaat gaaggagcat tattgttagt 2040 tagtttattc tgatcacatg attaatacaa aaattctaac atgctatgac cagttgatca 2100 tgatattaga attcatgtaa attatatatt ctgattgatt cgagcagctt tagatctgta 2160 atctaactct aagattcttt atcagtattg acccttttat ctaactattt gtgtgttcaa 2220 cctaatcaat ctaaatcatt taaaaacttc caatctcaat aaattataaa gctaagtttg 2280 atcttatgat tgatcattac agttaaataa atcatattta cagaaaattg gccattggtt 2340 tgcctccgaa gaggtctttt tttgttttta ttttttgatt tttttgggtt ttttggattt 2400 ttatatatat atatattgtt tatttatttg atttatttat tttattgttt ttatttattt 2460 tattcattta ttttatatct atataaacac acacatagtt ataactttat aatagctact 2520 tgtataatta aaataagtat atagttatat aagcacacac aaaaaaactt aaacaaacat 2580 aaatagattt attaaattat atagtcaagc ataaacataa acacacatgt gcacatatat 2640 gcacggttga cacttcaaag ttacacttcc aaggaagtgc tgggctttga acttttcttt 2700 gaatgatcac cataatcatc cacagaaagg ttagcactga agatcctgtc catgtactta 2760 acttgatcct catatttctt gagcgaaata gagctagctg taccagggtt actctcactg 2820 agtattttga cagcctgttt gaacataaca tccaaatcat ccttaaattc aacctgtgaa 2880 gcagaaagaa ccttagccac tttacaaact tgctcatagg tggagaagtt ctttatacct 2940 aacttttctt tctttatatt ttggtaataa gtcaaaggga aaataatcgg tgccagtccc 3000 cttatactag ataaaagagg tagaggtcct ccaatacata acatcatcct caaggcacaa 3060 gaatcataag atgcaggcac attcaaccca taagcagcaa ctaatggtag ttccatgatt 3120 ttcccataca tttcctgtct agcagcttca ttcttgcttt tctccaccat actaactatt 3180 tttgtcctga taaaagcttc tgtcctcttg aatgtccagt cctcaggtcc aacatcaata 3240 cttgtagcaa caatattttt accgcaaaaa ttatacttac cactcttgca ggctgcaaaa 3300 atctgtttcc tgcattttag gatattcaag cagtttgtaa aagttatctc tatatttttg 3360 ttgttgtcaa aaaaagcttt gaagctaaat ccaggagtgg agtcttctgt ttcaatttca 3420 acatctgctg taccaccagc caaaagttcc ttgattttct tttctgtaag ctgcttaacg 3480 ttagacatgg tgtttacaaa ggaaacgtct gatatgttgt ttgaactgat tttattagcg 3540 cctcgattgc tct 3553 //