ID   AB042294; SV 2; linear; genomic RNA; STD; VRL; 2214 BP.
XX
AC   AB042294;
XX
DT   11-MAY-2000 (Rel. 63, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Cucumber mosaic virus IA-3a, IA-CP genes for 3a protein, coat protein,
DE   complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2214
RA   Natsuaki K.T., Kawaguchi A.;
RT   ;
RL   Submitted (28-APR-2000) to the INSDC.
RL   Keiko T Natsuaki, Tokyo University of Agriculture, Department of
RL   International Agricultural Development; 1-1-1 Sakuragaoka, Setagaya-ku,
RL   Tokyo 156-8502, Japan (E-mail:keiko@nodai.ac.jp, Tel:81-3-5477-2412,
RL   Fax:81-3-5477-4032)
XX
RN   [2]
RA   Natsuaki K.T., Kawaguchi A.;
RT   "Cucumber mosaic virus (CMV) RNA3;Indonesia";
RL   Unpublished.
XX
DR   MD5; dcdddd0a3270334342be87e3184db64b.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC136033; 11884564.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3550809; 23730005.
DR   EuropePMC; PMC416521; 15163757.
DR   RFAM; RF01084; TLS-PK3.
XX
CC   Sequence updated (17-May-2000)
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2214
FT                   /organism="Cucumber mosaic virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             123..962
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="IA-3a"
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q9JFY5"
FT                   /protein_id="BAA95600.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELSSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHVAAGRTLVLPFNRLAEQTKPSDVARLLK
FT                   SQLNNIESSQYVLTHSKINQNARSESEDLNVESPPIAIGSFSASRSEAFRPQVVNGL"
FT   CDS             1258..1914
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="IA-CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9JFY4"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9JFY4"
FT                   /protein_id="BAA95601.1"
FT                   /translation="MDKSESTSAGRNRRRRPRRGSRSASSSADANFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDKGSYYGKRLLLPDSVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2214 BP; 515 A; 513 C; 526 G; 660 T; 0 other;
     gtaatcttac cactgtgtgt gcgtgtgtgt gtgtgtgtcg cgtcgtgtag agtcgtgttg        60
     tccgcacatt tgagtcgtgc tgtccgcaca ttttcttttc agtgtgttag atttcccgag       120
     gcatggcttt ccaaggtacc agtaggactt taactcaaca gtcctcagcg gctacgtctg       180
     acgatcttca gaagatctta tttagccctg aagccattaa gaaaatggct actgagtgtg       240
     acctaggccg gcatcattgg atgcgcgctg ataatgctat ttcagtccgg cccctcgttc       300
     ccgaagtaac ccatggtcgt attgcttcct tctttaagtc tggatatgat gtcggtgaac       360
     tgagctctaa aggatatatg agcgttcctc aagtattgtg tgctgttact cgaacagttt       420
     ctaccgatgc tgagggatct ttgagaatat acctggctga tctaggcgat aaggagttgt       480
     ctcctataga tggacaatgc gtttcattac ataaccatga tcttcccgct ttggtgtctt       540
     tccagccgac gtatgattgt ccgatggaaa ctgttgggaa tcgcaagcgg tgttttgcag       600
     tcgttatcga aagacatggt tatattgggt ataccggcac cacagctagc gtgtgtagta       660
     actggcaagc acgattttct tctaagaata acaactacac tcatgtcgca gctgggagga       720
     ctctagtact gccgttcaac agattagctg agcaaactaa accgtcagac gtcgctcgcc       780
     tgttgaagtc gcaattgaac aacatagaat cttcgcaata cgttttaacg cattcgaaga       840
     ttaatcaaaa tgcgcgcagt gagtccgagg atttaaatgt tgaaagccct cccatcgcaa       900
     tcgggagttt ttccgcgtcc cgctccgaag ccttcagacc gcaggtggtt aacggtcttt       960
     agtatcttcg ttgcgtatta gtatataagt atgtgtgtgt ctgtacataa tactatatct      1020
     atagtgtcct gtgtgagttg atacagtaga caactgtgac gcgatgtcgt gttgagaaga      1080
     gagcacatct ggttttagta aacccacatc ataactttga ggttcaattc ctcttgttcc      1140
     ctgatgggtc tctttacttt ttcatggatg cttctccatg aggttgcgtt tcgtctactt      1200
     atcttaagag tgtcgtgttg tattttctct tttgtgtagt agaatttgag tcgagtcatg      1260
     gacaaatctg aatcaaccag tgccggtcgt aaccgtcgac gtcgtccgcg tcgcggttcc      1320
     cgctcagctt cctcctccgc tgatgctaat tttagagtcc tgtcgcaaca actttcgcga      1380
     cttaataaga cgttagcagc tggtcgtcct accattaacc acccaacctt tgtagggagt      1440
     gagcgttgta aacctgggta cacgttcaca tctatcaccc tgaaaccacc gaaaatagac      1500
     aaagggtctt attatggtaa aaggttgtta cttcctgatt cagtcactga gttcgataag      1560
     aagcttgttt cgcgcattca aattcgagtt aatcctttgc cgaaatttga ttctaccgtg      1620
     tgggtgacag tccgtaaagt tcctgcctcc tcggatttat ccgttaccgc catctctgct      1680
     atgtttgcgg acggagcctc accggtactg gtttatcagt acgccgcatc cggagttcaa      1740
     gccaacaata aactattata cgatctctcg gcgatgcgcg ctgatattgg tgatatgaga      1800
     aagtacgccg tcctcgtgta ttcaaaagac gatgcgctcg agactgacga gctagtactt      1860
     catgttgaca tcgagcacca acgtattcct acatctgggg tgctcccagt ttgaaccagt      1920
     gttttcccag aatcctccct ccggttgctg tggcgggagc tgagttggca gtgttgctat      1980
     aaactgtctg aagtcactaa acgctttgcg gtgaacgggt tgtccatcca gcttacggct      2040
     aaaatggttc agtcgtggag aaatccacgc cagtagactt acaagtctct gaggtgccct      2100
     tgaaaccatc tcctaggttt cttcggaaga cttcggtccg tgtacttcta gcacaagatg      2160
     ctagtttagg gtacgggtcc ccccacttta gtgggggtct ccaaaaggag acca            2214
//