ID AB041962; SV 1; circular; genomic DNA; STD; VRL; 2908 BP. XX AC AB041962; XX DT 15-DEC-2000 (Rel. 66, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 4) XX DE Torque teno mini virus 5 DNA, complete genome, isolate: TGP96. XX KW . XX OS Torque teno mini virus 5 OC Viruses; Anelloviridae; Betatorquevirus. XX RN [1] RP 1-2908 RA Okamoto H.; RT ; RL Submitted (19-APR-2000) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2000.0588. RX PUBMED; 11080484. RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J., RA Tanaka T., Miyakawa Y., Mayumi M.; RT "Species-specific TT viruses in humans and nonhuman primates and their RT phylogenetic relatedness"; RL Virology 277(2):368-378(2000). XX DR MD5; fe4b2f2cfb6a8182859908fa3043aa9c. DR EuropePMC; PMC1143717; 15956568. DR EuropePMC; PMC3729974; 23060626. XX FH Key Location/Qualifiers FH FT source 1..2908 FT /organism="Torque teno mini virus 5" FT /host="Homo sapiens" FT /isolate="TGP96" FT /mol_type="genomic DNA" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687373" FT CDS 340..639 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q9DUB5" FT /protein_id="BAB19322.1" FT /translation="MSSCYKPTYYNTKGKQTQWINDIHCTHDLWCSCDHVLKHLLLSIA FT ERNEKIELTKEEKKQVLQCLTTTEEITTQNGDDGDLDEIGLDAIFAEELTEDAG" FT CDS 528..2543 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q9DUB4" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q9DUB4" FT /protein_id="BAB19323.1" FT /translation="MPYYYRRNYYPKWRRWRSRRNRFRRHFRRRTYRRRWVSNPFNKIT FT LKQWQPPYKKTCYIKGQTCLIYYNNDRLGYNSTMYEKSIVPFHWPGGGSFSVSKYTLDG FT LFDMHKECRNWWTGSNIDLPLCKYKGCTLTFYQAQNTDFIFKVTNEQPAVSNKLTYPST FT HPQIMLMSNQHHVLSSTQNRKKRKPYTKIHIPPPEMFENKWYFTQDLFRIPLLQIFATA FT ANMPNPYLKPNRKSNNTVFWGINTQSTQNREMSIETDQSWPFKKQGTQSFYFYYYTGTN FT PPSDTSQIKVADIIAVTDKKNNKPGESYHDQQTTSNKNWQQYFENYQQFWGNPFNNHLN FT EHPEYFYYSFISPETLKATAKTKTDQMTWKDLTDTNQSYALTKFDEPIFIPYQYNPERD FT TGEDTQCYFLSNREGHGWDPPGVPEIILEGFPLWLILWGYADFQKNLKKILNIDTTYIL FT TIKSKFAQRPRTYPIVIIDESFKQGFSPYEQTCLPEDITRWYPMYQYQTREQNKILQTG FT PFTPYIQNLQSENLCMYYKFRFQWGGSPPKTVNVENPSHQNIFPIPRNEHETTSLQSPG FT TAPESILYSFDFRHGDYTTKALARITKDWPIKETVSQITEPESAKLLQQMFQFLQTSEE FT TQEKKEKEMHQYIQLLRQQQQQYRERIASILNHQQL" FT CDS 2176..2514 FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="InterPro:IPR008474" FT /db_xref="UniProtKB/TrEMBL:Q9DUB3" FT /protein_id="BAB19324.1" FT /translation="MLKILPTRISFLYPVTSMKQLRYRVQGQPPKASYTHLTSDMETTQ FT QKLLQELQRTGQLKKLFLKLQNQSQQNYSNKCSSFSKHQKKRRRKKKKRCTSTSNSSDN FT SSSSTESE" FT repeat_region 2830..2908 FT /rpt_unit_seq="GC" XX SQ Sequence 2908 BP; 1158 A; 636 C; 443 G; 671 T; 0 other; taataaatat tcaacaggaa aaccacctaa tttaaattgc cgaccacaaa ccgtctctta 60 cttcctcttt ttactaatac ttcccttttt gctcattatt attcattaca ttaattagta 120 atctccgtaa ttccggggag gggccaacaa actatataac caagtacact tccgaatggc 180 tgagtttatg ccgccagacg gagacgggat cacttcagtg actccaggct gaacttgggc 240 gggagccgaa ggtgagtgaa accaccgtag tctaggggca attcgggcta gttcagtctg 300 gcggaacggg caagaaactt aaaatattat attttacaga tgtcaagctg ttataaacca 360 acatactata acacaaaagg caaacaaact caatggatta acgatattca ctgcacccac 420 gatttatggt gttcctgtga ccacgtactc aaacatctcc tactaagcat tgctgaaaga 480 aacgaaaaaa ttgaattaac caaagaagaa aagaaacaag tactacaatg ccttactact 540 acagaagaaa ttactaccca aaatggagac gatggagatc tagacgaaat aggtttagac 600 gccattttcg cagaagaact taccgaagac gctgggtaag caaccctttt aacaaaataa 660 ctttaaaaca atggcaaccg ccatataaaa agacttgcta cataaaagga caaacttgtt 720 taatatatta taacaatgac agacttggat ataacagtac aatgtatgaa aaaagtattg 780 taccttttca ttggccggga gggggaagct tttctgtaag caaatatact ttagatggat 840 tatttgatat gcataaagaa tgtagaaact ggtggacagg cagtaatata gatttaccat 900 tatgtaaata taaaggatgt acattaactt tttaccaagc acaaaataca gactttatat 960 ttaaagtaac aaatgaacag ccagcagtaa gcaacaaatt aacatatcct agcacacatc 1020 cacaaataat gctaatgagc aaccaacacc atgtactatc atccacacaa aacagaaaga 1080 aaagaaaacc atacacaaaa atacacatac caccaccaga aatgtttgaa aacaaatggt 1140 attttacaca agacttattt agaataccac tactacaaat atttgcaact gcagcaaaca 1200 tgccaaaccc atacttaaaa cctaacagaa aatcaaacaa cacagtgttt tggggaataa 1260 acacacaaag tacacaaaac agagaaatgt caatagaaac agaccaatca tggcctttta 1320 aaaagcaagg cacacaatcc ttttactttt actactacac tggcacaaac ccaccatcag 1380 acacaagtca aattaaagta gcagacataa tagcagtaac agacaaaaaa aacaacaaac 1440 caggagaaag ctaccatgac caacaaacaa catcaaacaa aaattggcaa caatactttg 1500 aaaattacca acaattttgg ggaaatccat ttaacaatca cttaaatgaa catccagaat 1560 acttttatta ctcttttata tcaccagaaa ctctaaaagc aactgcaaaa acaaaaacag 1620 accaaatgac ttggaaagac ttaacagaca caaaccaatc atatgcctta actaaatttg 1680 atgaaccaat attcatccca taccaatata acccagaaag ggacacagga gaagacacac 1740 aatgctactt tttaagtaac agagaaggcc acggatggga cccacccggt gttccagaaa 1800 ttatattaga aggctttcct ttgtggctaa tattatgggg atacgcagac tttcaaaaaa 1860 acttaaaaaa gatacttaac atagacacaa catatatact caccattaaa tcaaaatttg 1920 cacaaaggcc tagaacatat cctatagtaa ttatagatga atcatttaaa caaggattta 1980 gtccatacga acaaacatgc ttaccagaag acataactag atggtatcca atgtaccaat 2040 accaaacaag agaacaaaac aaaatactac aaacaggacc attcacacca tacatacaaa 2100 acctacaatc tgaaaattta tgtatgtact ataaatttag attccaatgg ggaggaagcc 2160 cacctaaaac agtaaatgtt gaaaatcctt cccaccagaa tatctttcct ataccccgta 2220 acgagcatga aacaacttcg ttacagagtc cagggacagc ccccgaaagc atcctatact 2280 catttgactt cagacatgga gactacacaa caaaagctct tgcaagaatt acaaaggact 2340 ggccaattaa agaaactgtt tctcaaatta cagaaccaga gtcagcaaaa ctactccaac 2400 aaatgttcca gtttctccaa acatcagaag aaacgcagga gaaaaaagaa aaagagatgc 2460 accagtacat ccaactcctc agacaacagc agcagcagta cagagagcga atagcatcaa 2520 tattaaacca ccaacaatta taggatgtat taaaagggtt aaactgtttg atgataacaa 2580 atgtaaaaat cgccgcttta cccctgaaga atttcaaact gaattagaaa tatgtaaatg 2640 gatgaaaaga ccccctagat attatgtaca tgatccaccc ttttacccct ggactgtacc 2700 agaacctaaa gtaaactttg ctcttaattt caaagaataa aggccagcat taattcactt 2760 agtggtgtca gtttatatta tttaaactta aataaacagt caccgcctcc ctaatacgca 2820 ggcgcacaag ggggctccgc ccccttaaac ccccaagggg gctccgcccc cttaaacccc 2880 caagggggct ccgccccctt aaaccccc 2908 //