ID AB041961; SV 1; circular; genomic DNA; STD; VRL; 3718 BP. XX AC AB041961; XX DT 15-DEC-2000 (Rel. 66, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 4) XX DE Torque teno douroucouli virus DNA, complete genome, isolate: At-TTV3. XX KW . XX OS Torque teno douroucouli virus OC Viruses; Anelloviridae; Zetatorquevirus. XX RN [1] RP 1-3718 RA Okamoto H.; RT ; RL Submitted (19-APR-2000) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2000.0588. RX PUBMED; 11080484. RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J., RA Tanaka T., Miyakawa Y., Mayumi M.; RT "Species-specific TT viruses in humans and nonhuman primates and their RT phylogenetic relatedness"; RL Virology 277(2):368-378(2000). XX DR MD5; 905e1c674d0aab644e70e1278c8fed93. DR EuropePMC; PMC1143717; 15956568. XX CC Partial sequence of this TT virus isolate (nt 285-382) has been CC deposited as accession no.AB032279. XX FH Key Location/Qualifiers FH FT source 1..3718 FT /organism="Torque teno douroucouli virus" FT /isolate="At-TTV3" FT /mol_type="genomic DNA" FT /isolation_source="Douroucouli" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687383" FT CDS 462..854 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUB8" FT /protein_id="BAB19319.1" FT /translation="MGDWFMQGSPPDFAVQEDRWLKAVESCHQLFCSCSSAWDHLRNIL FT QTRGYWPQGPPPYRSEPHTEHSRPPPPKKRRPWCGGDGGGDAGAGPSGVAGTAAGGAGG FT DGAVGPVEEDDPTVADLIAAMEEDER" FT CDS 692..2854 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q9DUB7" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUB7" FT /protein_id="BAB19320.1" FT /translation="MVWRRRWWRRRRRPVWRRRYRRWRRRRRWRRRPRRRRRPYRRRPY FT RRYGRRRKVRRRRRRTLVVRQFQPPYQRRCRVSGLEPLLYFGKKEEERHFYGNRQIMKD FT VDQTEGGGVTDGVFSLEELYESYQEGWNHWSASNQMLPLVRYFGCKITLYRSATDSYIF FT WWTNRPPFQVDRQFWVGMHPYWMLRRGRKVVMLSKQLKPFAKDHVTIKIGPPALMKTKW FT YFARDFCKTWLLQWRACFFNPIDPYIPRGANNTTVTFYGFPGHSYPSQSLYYTWQEHLA FT ETNVWGITNESEKTKFEALRKAWNEQATKGPVAGYKAVLQAMNAWASVAAPGPEGSNFA FT KGTNVALGLANLLWLIYSQYYWQNRSPSPWGLPGATLEAMKHPEAWKPYAYKYSWSHDK FT GKGNRFAICDWPYKDQHGEQTTPLNFDLEIKDAPLWWCVTAAYDWAIRQGKNPANWSFF FT VRSDYTWPRADNIILAYSSYFADNVVKNKYADPQHATGGYFTLYRAPNLIDGREAIDII FT YRNGPFAPKQEESTGNATIKYRFYFKWGGTQRPPRPQPTDPCQQPRWEGPNFPPFDGRA FT RIDNPSDQDPRSYFWPFDTRRGSLTASAVDRVKRSLDAVTEPSETRLREGEETYGLPPP FT EKRARWGFPSILPTENPTDEDERYLEAEADTSSSDATDGVPETPFELLQHIQRDRDKRR FT ELRGRLARLILRLRRRQDPELQNYYP" FT CDS 2409..2864 FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUB6" FT /protein_id="BAB19321.1" FT /translation="MAELASIIRPTKTPGRTSGRSTPGAAHLPPPLSTGLSDLLMLLQS FT PQKPGSGRARRRTVCRPRRSGPDGDFRPSSRRRTPRTRTSDTSRRRRTPAAPTRRTVCR FT RRPSSSSNTSSGTATSGESSEADWRDSSSASDDDRIPSSKTTTLKAR" FT repeat_region 3644..3718 FT /rpt_unit_seq="GC" XX SQ Sequence 3718 BP; 842 A; 1195 C; 1046 G; 635 T; 0 other; taattatgca aagtaggcgg agacagcaac cacgcccaac cacgcctact ttgaataatg 60 catgttaatg agcaaaaggg gaagtctctc tcattggttc gtttaaaaaa cgtcaccgag 120 cgggaaactc cgggggcgtg gtccactaaa aggggaagtt ctcctcattg gtccgctaaa 180 cagccaatag gaaagcgacc cccagaatca cctaatctgc attgacgtgt ttccttccgc 240 ttttcgggag aggatataag caagtgcact gacgaatggc tgagtttacc gtgccgggga 300 gcagcgtctg ccgagcggag cgaggcgcga ccgagcgact gggcgggagc cgggaacatc 360 cgaaggtatg tggacgtcta ggggcaattc gggcaggagc acccggcgca acgggcaagg 420 ctcttaaaaa cgcttgtccc tcttcatccc catacagtgc gatgggagac tggttcatgc 480 agggcagccc cccggacttc gcggtccagg aggacagatg gctcaaggcc gttgagagct 540 gccaccagct gttctgcagc tgctccagcg cctgggacca cctgaggaac atcctgcaga 600 cccgcggata ctggccccag ggaccaccac cgtaccgatc ggaaccccac acggagcact 660 cccgtccgcc ccctcctaaa aagcggaggc catggtgtgg aggcgacggt ggtggagacg 720 ccggcgccgg cccgtctggc gtcgccggta ccgccgctgg aggcgccgga ggcgatggcg 780 ccgtcggccc cgtagaagaa gacgacccta ccgtcgccga ccttatcgcc gctatggaag 840 aagacgaaag gtgaggagga gacgcagacg gactctagtc gtcagacaat ttcagccccc 900 ttaccagaga cgctgtaggg tgtccggact cgaacccctc ctttactttg gcaaaaagga 960 ggaggagaga cacttctacg gtaacagaca gataatgaag gacgttgatc agacggaggg 1020 gggcggggtg acggacggag tgttctccct ggaggagctc tacgagagct accaggaggg 1080 ctggaaccac tggtcggcca gcaaccagat gcttcccctg gttcggtact tcgggtgtaa 1140 aatcaccctg tatcgctcgg cgacagacag ctacatcttc tggtggacta acaggccgcc 1200 gttccaagta gacagacagt tctgggtggg catgcatcct tactggatgc tccgcagagg 1260 tcgcaaggtg gtcatgctaa gtaaacaact aaaacccttt gcaaaagacc acgtcaccat 1320 caagatagga ccgcccgccc tcatgaaaac taagtggtac tttgccaggg acttctgcaa 1380 aacctggctg ctccagtgga gagcctgttt ctttaacccc atagatcctt atatccccag 1440 aggcgccaat aacaccaccg ttaccttcta tggctttccc ggacactcgt acccctcgca 1500 gagcctatac tatacgtggc aagaacatct tgcagaaaca aacgtttggg gaatcaccaa 1560 cgaatctgaa aagacaaaat ttgaggccct ccgaaaagct tggaacgagc aggccaccaa 1620 aggtcccgta gcgggttaca aagcggtcct acaggccatg aacgcctggg ctagcgttgc 1680 cgccccaggt ccagagggtt ccaactttgc caaagggacc aacgtggctc taggcctcgc 1740 caacctgctg tggctaatat actcccagta ctactggcaa aatagatccc ccagcccctg 1800 gggcctgcca ggtgccaccc tggaggccat gaaacacccg gaggcctgga agccgtacgc 1860 ctacaaatac agctggtctc acgataaagg caagggcaac agattcgcca tatgcgactg 1920 gccctacaaa gaccagcacg gagagcagac cactccgtta aactttgacc tggaaataaa 1980 ggacgcccct ctatggtggt gcgtaaccgc ggcgtacgac tgggccatca ggcagggcaa 2040 aaacccggcc aactggagct ttttcgtccg ctccgattat acctggccgc gggccgacaa 2100 catcatcttg gcctactcaa gctactttgc agacaacgta gttaaaaata agtatgccga 2160 cccacaacat gccacgggcg gctactttac cctatacaga gcccctaacc tcattgacgg 2220 cagggaggcc atagatatca tttaccgtaa cggtcctttc gctcctaaac aggaggagag 2280 caccggtaac gccactatca agtaccgctt ctactttaaa tggggcggca ctcagagacc 2340 gcccaggccc cagcccacag atccttgcca gcaaccaagg tgggagggac ctaacttccc 2400 tccgttcgat ggccgagctc gcatcgataa tccgtccgac caagaccccc ggtcgtactt 2460 ctggccgttc gacacccggc gcggctcact taccgcctcc gctgtcgacc gggttaagcg 2520 atctcttgat gctgttacag agccctcaga aacccggctc cgggagggcg aggagacgta 2580 cggtctgccg cccccggaga agcgggcccg atggggattt ccgtccatcc tcccgacgga 2640 gaaccccacg gacgaggacg agcgatacct cgaggcggag gcggacacca gcagctccga 2700 cgcgacggac ggtgtgccgg agacgccctt cgagctcctc caacacatcc agcgggaccg 2760 cgacaagcgg cgagagctcc gaggcagact ggcgagactc atcctccgcc tccgacgacg 2820 acaggatccc gagctccaaa actactaccc ttaaagcccg ctaaacttac gttctggccg 2880 gaggactggg acactaaacc ggtcaccccc ggccgcatca cgggccccga gctcctccta 2940 gagctggagg tggcccgggc ttttaaacgg ttccctcgca cccaccgcca agacgccccc 3000 acctataagt ggctcaacaa gagccgtccc tctcagccca tctcctacaa agtgtgcttc 3060 gatctgtatc caaataaaat ctaactgtgg ccatcagtac gactctccgt tggcctggga 3120 cgtttagtaa agtctgaccc cccccttggg gcgcccccta gaggtcgcac caccggcgag 3180 ttctccctag ggcgcccggc ctgcggccgg ggggccggct cggcaggcgc tgcgcgcctg 3240 ccgctcgccg gagcaattcg cggctcgcag gctcgccgcg cttttcacgt ggcccgcgca 3300 gcctctcacc tcacccgtgg gcgcgcaagg cgcgcccccg ggatcgcagt ctcgacagca 3360 cctagaatcg agcacggcgc gcgcaacgcg cgcgccgtac gtcgcgcgct gcgctaggct 3420 tcccgccacc gatcggctcg cttcgctcgc cgctcggctg gccttaattt gctaaaggaa 3480 ctccgagacg ccattggaca ctggggcagg tgaaccgcct gagggtcgca ccaagacgct 3540 cgctgacagc ggcccccttc gggggccctg tcccacgctc gctcctaacg tatcagtgga 3600 gcgagcgcga tccgaaaccg aaagtgcaaa aagaggaagg aaaggggggg cgttgccccc 3660 ccttcaaccc cccggcgggg gggccgagcc ccccctgcac ccccccggac tccgcccc 3718 //