ID AB041959; SV 1; circular; genomic DNA; STD; VRL; 3763 BP. XX AC AB041959; XX DT 15-DEC-2000 (Rel. 66, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 4) XX DE Torque teno virus 25 DNA, complete genome, isolate: Mf-TTV9. XX KW . XX OS Torque teno virus 25 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3763 RA Okamoto H.; RT ; RL Submitted (19-APR-2000) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2000.0588. RX PUBMED; 11080484. RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J., RA Tanaka T., Miyakawa Y., Mayumi M.; RT "Species-specific TT viruses in humans and nonhuman primates and their RT phylogenetic relatedness"; RL Virology 277(2):368-378(2000). XX DR MD5; 8f09368c3b190b4293879e63ab6549cd. DR EuropePMC; PMC1143717; 15956568. XX CC Partial sequence of this TT virus isolate (nt 128-233) has been CC deposited as accession no. AB032309. XX FH Key Location/Qualifiers FH FT source 1..3763 FT /organism="Torque teno virus 25" FT /isolate="Mf-TTV9" FT /mol_type="genomic DNA" FT /isolation_source="Japanese macaque" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687364" FT CDS 393..803 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUC5" FT /protein_id="BAB19312.1" FT /translation="MTNQWEPTTLNAWGREEAWLRSVVDSHQSFCGCNDPGFHLGLLLH FT SAGRHLGGPGGPQPPPAPGGPGVGGEGPRRFLPLPGLPANPEEPGHQRPPCPGGPGDAG FT GAGGVDAETGEGEWRPEDIAELLDGLEDAEKR" FT CDS 677..2848 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q9DUC4" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUC4" FT /protein_id="BAB19313.1" FT /translation="MPWWPWRRWRRWRRRRGNWRRRVAPRRYRRTARRARRRRKAVRRR FT RRRRVRRRGYYRRYRRRRRYKRRLLILKQWQPTTNLRLTVKGLIPVVVMGKGKTQNNFG FT QWEQTVPLEGESYGGSFTIRKFTLQTLYEDYLKLRNRWSRSNTDLELIRYTGLNLRLYR FT HEFSDYIVHYSLETPMEVGLESHMLAHPLKMIMSSKHVTVPSLLTKKGGRRYLRLKIPP FT PKLMMTQWYFQKEFCQVGLVLLSISTATLMHPWMAPFVNSPALTIYAVNHKTYSDMSIL FT PSNNQGSTKNELIETLYTAEHTYNPMAQRIWGNIKPQNTNFTPENYWNKWNEIHTKIKT FT NRQSELTQLKQMRKRLELTTENDYQDPNFGLSYGLYSPLLLYPEMYFPEQSKVYQKARY FT NPLLDQGIGNVVWTEPLTKKTCDYASQAYNVIKDAPLYLALFGYIDICSKLAKDKSFYL FT SNRVCVKCPYTVPQLLSKTNATLGHVILSENFMRGLVPSKDSYVPLYMRGKWYPSIYHQ FT EEVIEAIVSSGPFVPRDQITKSLDITIGCRFGFRIGGNLLNPKQVGDPCKQPTHPLPAP FT GGGDLLRAVQVSDPRKVGIQFHPWDLRRGMLSTSSIKRMLQDSDDDESIEFPPKAWPGD FT PVPVGRTLEERCSSSLYHLLQEQATPPPFKKPRTEDQEENPEETTQLQLFQELQRQREL FT QLQLKRGFRGLVEEMIKSHRHLALDPYLK" FT CDS 2535..2795 FT /codon_start=1 FT /transl_table=1 FT /note="ORF3" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUC3" FT /protein_id="BAB19314.1" FT /translation="MMMNQLNSLQKLGQETRYPLAEPSKSVAVPLSITSSKSKRRRRHS FT RSRERKTRKKTRRKQLSSSSSKSSSDKENCSSSSSGGSGDW" FT repeat_region 3671..3763 FT /rpt_unit_seq="GC" XX SQ Sequence 3763 BP; 988 A; 1095 C; 930 G; 750 T; 0 other; tacgtcacaa aagggggcgg agttcccgcc caaaagattt gaattcattg gtccacgtca 60 cttccttgac gctttcctgg gcggggaaaa gggccaatat aagccggagc acttccgaat 120 ggctgagttt ttcccccgag acgcaggcga ggacgaaccg cgcagcctgg tgagtgacct 180 cggccgcccg tgggcgggtg ccgaagcggg aggtttaccc ccgcgagtca aggggcaatt 240 cgggcaaggg cggtctcggg gaccgggcaa ggctctgaaa gccggacccc ctctcacttt 300 tacagggctt cattctctat cgctatcgcc tggttccaac gggggctatc ggagactacc 360 tactcgtcag aactccgttt cgctggggtg gtatgaccaa ccagtgggag cccactactc 420 tcaatgcctg gggtcgcgag gaggcgtggc tcagatccgt cgttgattcc catcagtctt 480 tttgtggctg taatgatcct ggctttcatc ttggtctcct acttcatagt gcgggccgcc 540 atcttggggg tcctggaggg ccccagcccc cgcctgctcc ggggggaccg ggagtaggcg 600 gcgagggtcc ccgtcgcttt cttccgcttc cgggtttgcc tgccaatcct gaggagcctg 660 gtcatcaaag gccgccatgc cctggtggcc ctggcgacgc tggaggcgct ggaggcgtcg 720 acgcggaaac tggagaaggc gagtggcgcc cagaagatat cgccgaactg ctagacgggc 780 tcgaagacgc cgaaaagcgg taaggagacg ccggcgccgc agggtccgca gacggggcta 840 ctacagacgc taccgacgca ggagacgcta caagagacgc ttactaatac taaaacagtg 900 gcagcccacc actaacctca gactgacggt gaaaggactg ataccagtgg tagtgatggg 960 caagggaaag actcagaata attttggaca gtgggaacag actgtgcccc tagagggaga 1020 gagctacggg ggcagcttta ccatcagaaa gttcacgctg cagaccctgt atgaggacta 1080 tctcaaactt agaaacagat ggtctcgcag caacacagac ttagaactca tcagatacac 1140 aggactcaac ctgagactgt acagacacga gttcagcgac tacattgttc actacagtct 1200 agaaacaccc atggaggttg ggctagaatc ccacatgcta gcacacccgc taaagatgat 1260 catgtcatca aaacacgtca cggtacccag cctactcacc aaaaaaggag gcaggagata 1320 cctaagacta aaaataccac ccccaaaact catgatgact cagtggtact tccaaaaaga 1380 attctgtcag gttggattag tactattatc tattagcaca gccacactta tgcacccatg 1440 gatggcaccg tttgtaaact ccccagcact caccatctat gccgtaaatc acaaaacata 1500 ctctgatatg tccattctac catctaataa tcaaggatct acaaaaaatg aactaattga 1560 aacactatat acagctgaac acacatacaa cccaatggca caaagaatat ggggaaatat 1620 caaaccacaa aatacaaatt tcacacctga aaattattgg aacaaatgga acgaaataca 1680 cacaaaaatt aaaaccaata ggcaaagtga gctaacccag ttaaagcaaa tgagaaagag 1740 attagaacta acaacagaaa atgattatca agaccccaac ttcggcctaa gctatggtct 1800 ctacagccct ttactattat atccagaaat gtactttcca gaacaatcaa aagtgtacca 1860 aaaagctaga tacaacccac tactagatca gggcatagga aacgtagtat ggacagaacc 1920 ccttacaaaa aaaacatgtg attatgcttc acaagcctat aatgtcatca aagatgcacc 1980 actatatcta gctctatttg gatacattga tatatgctca aaactcgcaa aagataagag 2040 cttctaccta tctaacagag tatgtgtaaa atgcccatac actgtaccac aattattaag 2100 caaaacaaac gcaactctag gacatgttat actttcagag aactttatgc gaggactagt 2160 gccatccaaa gatagctatg ttccactata catgagaggt aagtggtatc cctctatcta 2220 tcaccaagag gaggtaatag aagccatagt ttccagcggg cccttcgttc cccgagacca 2280 gatcaccaaa tccctagata tcactatagg gtgcagattc gggtttagaa tcggaggtaa 2340 cctactgaat cccaaacagg tgggcgaccc ctgcaagcag ccgacgcacc ccctcccggc 2400 tcccggaggc ggtgacctcc ttagggcagt acaagtgtcg gacccgcgga aagtgggcat 2460 ccaattccac ccctgggacc tcagacgagg catgcttagc acgagcagta ttaagagaat 2520 gctccaagac tcagatgatg atgaatcaat tgaattccct ccaaaagctt ggccaggaga 2580 cccggtaccc gttggccgaa ccctcgaaga gcgttgcagt tcctctctct atcacctcct 2640 ccaagagcaa gcgacgccgc cgccattcaa gaagccgcga acggaagacc aggaagaaaa 2700 cccggaggaa acaactcagc tccagctctt ccaagagctc cagcgacaaa gagaattgca 2760 gctccagctc aagcgggggt tccggggact ggtagaggag atgatcaagt cccaccgtca 2820 tctagcccta gacccctacc taaaataggc aaagccgctc tcctcttccc ggacaggccc 2880 atctgcagca ctcccaaaaa aagaaagctt tttaccccca cgctcttcga tctagaaact 2940 gaagagcaac tggctcaggc cttcaaacgc cccaaaagag aataccggct ccccggggac 3000 ctaccctgct accccgacct ccccagaccc cccactcaat tcagagtctc ctttaagctc 3060 aactttcaat aaagcgatgc ctacaatgca cactggtcgg tgtccattta tataagtcac 3120 gtcccagtga ctgggggcgc gggatcgggg tcacgggtcc gggcgctgcg cgcccgtccc 3180 cgcgtggggg gcgtacagag gtcgctcccg gtgttaggcg tcgccggcgc tgcgcgccgg 3240 ctccgccgaa cgctcctggc gccggaacgt ccgcgcttgc gcgcgtccga acctcactcg 3300 ctccggctcg cttcgctcgc ctccgctccc tcggatccgg ctagtcgcgg aaactttatt 3360 aaacacactc cgaggggggc gcaccgcccc aagtgcaccg ccctgtgacg tatttccggg 3420 agtgacgtat ttccggttcc ggtgacgtat atccggctgt gacgtgtttc cgcatccgct 3480 acctcacatc cgggcgccat tttaaagtgg cggaccttcc ggtgacgtgt ttccgtttcc 3540 gcgactagcc ggcggccata tttgtagtcc cttcctcttt cgctttcgcc aaaaagagga 3600 agttggccgt tacgctccat cgggggttcc tctttttcgc cgctaaaaga ggaacttcgc 3660 actatgcggg atggccacag gggggcgctc ccgcgccccc cccccgccca gggggcgggg 3720 cccccccccc gcggggggct ccgccccccg gccccccccg tgc 3763 //