ID AB041957; SV 1; circular; genomic DNA; STD; VRL; 3690 BP. XX AC AB041957; XX DT 15-DEC-2000 (Rel. 66, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 4) XX DE Torque teno virus 4 DNA, complete genome, isolate: Pt-TTV6. XX KW . XX OS Torque teno virus 4 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3690 RA Okamoto H.; RT ; RL Submitted (19-APR-2000) to the INSDC. RL Contact:Hiroaki Okamoto Jichi Medical School, Immunology Division and RL Division of Molecular Virology; 3311-1 Yakushiji, Minamikawachi-Machi, RL Kawachi-Gun, Tochigi 329-0498, Japan XX RN [2] RX DOI; 10.1006/viro.2000.0588. RX PUBMED; 11080484. RA Okamoto H., Nishizawa T., Tawara A., Peng Y., Takahashi M., Kishimoto J., RA Tanaka T., Miyakawa Y., Mayumi M.; RT "Species-specific TT viruses in humans and nonhuman primates and their RT phylogenetic relatedness"; RL Virology 277(2):368-378(2000). XX DR MD5; 64d837dd217ac728c78616b83bce7a5f. DR EuropePMC; PMC1143717; 15956568. DR EuropePMC; PMC3302375; 22171250. DR EuropePMC; PMC434092; 15220423. XX CC Partial sequence of this TT virus isolate (nt 102-199) has been CC deposited as accession no. AB032293. XX FH Key Location/Qualifiers FH FT source 1..3690 FT /organism="Torque teno virus 4" FT /isolate="Pt-TTV6" FT /mol_type="genomic DNA" FT /isolation_source="chimpanzee" FT /note="originally submitted as 'Torque teno virus'" FT /note="synonym: TT virus" FT /db_xref="taxon:687343" FT CDS 260..718 FT /codon_start=1 FT /transl_table=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUD0" FT /protein_id="BAB19307.1" FT /translation="MHFSKLSRRKKGKVPLPPLPTAPLPPHRPRMSGTWCPPVHNVPGL FT ERNWYESCLRSHAAFCGCGDFVSHLNNLANRLGRPPAPRPPGAPQPPAVRALPALPAPE FT DRFPNPPGWPGPGGGAAGAGAAAGRDGGDGGDAEPGDEDLDALFAADE" FT CDS 595..2802 FT /codon_start=1 FT /transl_table=1 FT /note="ORF1" FT /db_xref="GOA:Q9DUC9" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/Swiss-Prot:Q9DUC9" FT /protein_id="BAB19308.1" FT /translation="MAWPWRRRRWRWRRRRPRWRRWRRRRTWRRRPRRAVRRRRVRRRG FT RGWRRLYRRYRRRRGRRTYKKKPVLTQWQPTVRRRCFIIGYMPLIICGENLTSKNYASH FT ADDFVKDGPFGGGMTTMQFSLRILYDEFLRFLNIWTHSNQDLDLARYHGFKLTLYRHPT FT VDFIVIIRNSPPFEDTELTGPNTHPGMLMLRHKKILVPSLRTRPSRRHKITVRIGPPKL FT FEDKWYSQTDICDVILATVYATACDLQYPFGSPLTENYCISFQVLGSAYNNLISNTLNP FT NEEQQDIKSAIYNNVNAYLTRITESHMANLISKAPPKQVLKSSDGSLQTDHNDTQFGGN FT PYNTNQFTTTTVNKIIQGAQNYLTTIKTHLQPNNSAINPNTQWHLEYHAGIYSAPFLSA FT GRLNPEIKGLYTDITYNPMMDKGTGNKIWCDSLTKADMKYTEGRSKYLIENLPLWAAVW FT GYLDYCTKTSGDAAFHYNYRVTLISPYTSPMLFNPQDPTKGFVPYSLNFGLGKMPGGKG FT YVPLRMRANWYPYFFHQQKVLEAIGMSGPFTYRSDEKKAVLTSRYKFKFTWGGNPVSHQ FT VVRNPCKGTGGASASRKPRSVQVTDPKYNTPEITTHTWDIRRGWFGKRFIDRVQQQQAS FT PELLADPPKRPRKEIKGLTEADQEAEKDSGLRLRQVQPWMSSQETQSEQESAPEEQTVE FT QQLRNQLHTQQLLGFQLRSLMYQVQQTHRNSFIHPLLLPRA" FT repeat_region 3567..3690 FT /rpt_unit_seq="GC" XX SQ Sequence 3690 BP; 1011 A; 1102 C; 874 G; 703 T; 0 other; taagtcacat gacccccgca ggccaatcgc caggtactac gtccacttcc tgggctggat 60 cttcccggcc atataactag ctgcacttcc gaatggctga gtttatgccg cccgtccgca 120 gacggaggag gcgctgccgc cgaccgcgcg tcgtcccgag ggcgggtacc cgaggtgagt 180 ttacacaccg aggttaaggg gcaattcggg ctcgggactg gccgggctat gggcaaggct 240 cttgtgggac gctcttaaaa tgcacttttc taaactgtcc cgcaggaaga aagggaaagt 300 gccactgccc ccactgccga ctgcaccgct acctccgcac cggcctagaa tgagcggtac 360 ctggtgtcca cccgtccaca atgtcccggg gctggaacga aactggtacg agtcctgtct 420 tcgttcgcat gctgcttttt gtggttgtgg tgattttgtt agtcatctta acaatctggc 480 gaatcgtctc ggacgtcctc ctgcaccccg tccccccgga gcaccgcagc cgcctgcagt 540 aagagccctg ccggcgctcc ccgctcccga ggaccgtttc cctaatcctc cgggatggcc 600 tggccctgga ggcggcgccg ctggcgctgg cgccgccgcc ggccgcgatg gaggcgatgg 660 aggagacgcc gaacctggag acgaagacct cgacgcgctg ttcgccgcag acgagtaagg 720 agaaggggtc gcgggtggag gaggctatac agacgctatc gcaggcgacg cgggcgacgc 780 acatataaaa aaaaaccggt actaactcag tggcagccca cagtgagaag acgctgtttt 840 atcatagggt acatgcctct cataatctgt ggtgaaaacc tcacctctaa aaactatgcc 900 agccacgccg atgactttgt taaagacgga cctttcgggg gggggatgac taccatgcaa 960 tttagcctca gaatactgta cgacgagttt ctcaggttct taaacatctg gacgcacagc 1020 aaccaggatc tagacctagc caggtaccac ggctttaagc taactcttta cagacaccca 1080 acagtagact ttattgtaat aattagaaac tctccaccat ttgaggacac agaactcaca 1140 ggcccaaaca cacaccccgg catgcttatg ctcagacaca aaaaaatact agtgcctagc 1200 cttcgcacca gaccctccag aagacataaa ataacagtaa gaatagggcc accaaaactg 1260 tttgaagata agtggtacag ccaaacagat atctgcgacg ttattcttgc aacagtgtat 1320 gcaaccgcat gtgacctgca atatccgttc ggctcaccac taactgaaaa ctattgcatt 1380 agcttccaag ttttaggaag tgcttacaac aatctaatta gcaacactct aaacccaaat 1440 gaggaacaac aagacattaa atcagcaatt tacaataatg ttaatgcata cctaacaaga 1500 attactgagt ctcacatggc taatttaata tcaaaagcac caccaaaaca agtccttaaa 1560 agtagtgatg gaagtttaca aacagaccac aatgacaccc agtttggagg caatccatat 1620 aacactaacc agtttacaac cacaacagta aacaaaataa tacaaggagc ccaaaactat 1680 ttaactacaa ttaaaacaca tctacaacct aacaactcag caataaaccc aaacactcaa 1740 tggcacttag aataccacgc aggcatatac agcgctccgt ttttatcagc aggcagactg 1800 aacccagaaa taaaaggcct atacacagac ataacatata accccatgat ggacaaaggc 1860 acaggcaaca aaatctggtg cgattcactc actaaggcag acatgaaata cacagaaggc 1920 agatccaagt acctcataga aaacctgcct ctctgggccg ccgtctgggg ctacctagac 1980 tactgcacaa aaacctcagg agacgcagct ttccactaca actatagagt aacactcatc 2040 tctccataca ccagccccat gctattcaat ccccaagacc ccacaaaagg cttcgtacct 2100 tacagcctga actttggcct aggtaaaatg ccaggcggca aagggtacgt ccccctaaga 2160 atgagagcaa actggtaccc gtacttcttt caccaacaaa aagtactgga ggccataggc 2220 atgtcaggac ccttcacata cagaagcgac gaaaagaaag cagtactaac cagtcgctac 2280 aaatttaaat tcacatgggg cggcaatcct gtctcacacc aggtggtccg aaacccctgt 2340 aaaggcaccg gcggcgcctc agccagtcga aaacctcgtt cagtacaagt cactgacccg 2400 aaatacaaca cgcccgagat cacaacacac acctgggaca tcagacgtgg atggtttggt 2460 aaaagattta ttgaccgagt gcaacaacaa caagcatctc ctgaactcct tgcagatcct 2520 ccaaagagac cccgaaaaga gatcaagggg ctcacggagg ccgaccaaga agcagaaaaa 2580 gactctggac tccgactcag acaagtccag ccgtggatgt catcgcaaga aacgcagagc 2640 gagcaggaaa gcgcgccaga ggagcagacg gtggagcagc agctcagaaa ccaactccac 2700 acgcagcagc tcctcggatt ccagctccga agcctcatgt accaagtcca acaaacgcac 2760 agaaacagct ttatacaccc cctattgtta ccccgggctt aggtaaaaag tggctgctcc 2820 cagagagggt acctatagtg ttcacccccc aacagtggga ggacgagtat gttaccgcca 2880 aacactggga tagaccacct aaacacaacc ccctagacac tcccttctac ccctgggcac 2940 ccaaagcccc tcctcaatgc cgtgtaactt ttaagcttgg atttcaataa agcgaggccg 3000 tgggagtttc acccgtcggt gtctgtttat aaaagtcact aaggcctccg agcgtagcga 3060 ggaggccgac cctccgccaa ggagcagctt cctcggggtc gcgcgctacg ccttcggctg 3120 cgcgcgacac ctcggccccc ccctcgcccg tccgcgcttg cgcgcgtccg accttcggcc 3180 tcgggggggg cgggggcttt actaaacaga ctccgagacg ccattggatc tcggagctgc 3240 cattcagcaa cgtaggtgag tggggccaga ctatcgacgt attgccttta tcttctcgcc 3300 attggtccgt ttaaaacacg ccataggccg cggaccccat tttcgcccgc caaaatcgct 3360 tcccggcgcg ttttagtgac gtcacgggcg ccatcttgta aggggtcgaa ggtcagacca 3420 cgtggtaagt cacgtggggg cagctgctgt aaacccggaa gtagctgacc cgcgtgactg 3480 gtcacgtgac ctgacgtcac agccgccatt ttagttcaca aaatggccga cttccttcct 3540 cttttttaaa caaaaagcgg aaataaccgt ccgggggcgg ggcgcgcgct tcgcgcgcgc 3600 cccggggggg agcacagctc cccccccccc gcgcgcatgc gcgcgggtcc cccccccctc 3660 ggggggctcc gccccccggc cccccccggc 3690 //